Hatice Gulcin Ozer

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 4

Top Topics

Working Environment

Visual Analytics

Top Venues

IPDPS Workshops

Publications

Tareian Cazares, Richard E. Higgs, Jibo Wang, Hatice Gulcin Ozer
SeedMatchR: identify off-target effects mediated by siRNA seed regions in RNA-seq experiments. Bioinform. 40 (1) (2024)
Sidharth Mohan, Hatice Gulcin Ozer, William C. Ray
The Importance of Weakly Co-Evolving Residue Networks in Proteins is Revealed by Visual Analytics. Frontiers Bioinform. 2 (2022)
Eric Franz, Hatice Gulcin Ozer, Trey Dockendorf, Venkat Sundar Gadepalli, Amy Webb, Alan Chalker, Maciej Pietrzak, Morgan E. Rodgers, Douglas Johnson, David E. Hudak
Scaling R Shiny Apps to Multiple Concurrent Users in a Secured HPC Environment Using Open OnDemand. PEARC (2019)
Venkat Sundar Gadepalli, Hatice Gulcin Ozer, Ayse Selen Yilmaz, Maciej Pietrzak, Amy Webb
BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation. BMC Bioinform. (24) (2019)
Yi Wang, Gagan Agrawal, Hatice Gulcin Ozer, Kun Huang
Removing Sequential Bottlenecks in Analysis of Next-Generation Sequencing Data. IPDPS Workshops (2014)
Hatice Gulcin Ozer, Yi-Wen Huang, Jiejun Wu, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang
Comparing Multiple Chip-Sequencing Experiments. J. Bioinform. Comput. Biol. 9 (2) (2011)
Jie Zhang, Yang Xiang, Liya Ding, Kristin Keen-Circle, Tara Borlawsky, Hatice Gulcin Ozer, Ruoming Jin, Philip R. O. Payne, Kun Huang
Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia. BMC Bioinform. 11 (S-9) (2010)
Hatice Gulcin Ozer, Doruk Bozdag, Terry Camerlengo, Jiejun Wu, Yi-Wen Huang, Timothy D. R. Hartley, Jeffrey D. Parvin, Tim Hui-Ming Huang, Ümit V. Çatalyürek, Kun Huang
A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments. BICoB (2009)
Terry Camerlengo, Hatice Gulcin Ozer, Pearlly Yan, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang, Mingxiang Teng, Lang Li, Yunlong Liu, Francisco Perez, Tahsin M. Kurç
Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case Study on Integrating QUEST with GenePattern in Epigenetics Research. BIBM (2009)
Abhisek Kundu, Hatice Gulcin Ozer, Tara Borlawsky, Kristin C. Circle, Kun Huang, Philip R. O. Payne
Clinical Attribute Network for Chronic Lymphocytic Leukemia. BIBM (2009)
Hatice Gulcin Ozer, William C. Ray
Informative Motifs in Protein Family Alignments. WABI (2007)
Hatice Gulcin Ozer, William C. Ray
MAVL/StickWRLD: analyzing structural constraints using interpositional dependencies in biomolecular sequence alignments. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
William C. Ray, Hatice Gulcin Ozer
Discovering biostructure constraints using VRML visualization. SIGGRAPH Posters (2005)