Fei Liu

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 21

Top Topics

Biological Systems

Colored Petri Nets

Top Venues

Briefings Bioinform.

BMC Syst. Biol.

Publications

Jiaju Wu, Zhengchang Wen, Haitian Huang, Hanjing Su, Fei Liu, Huan Wang, Yi Ding, Qingyao Wu
A reweighting method for speech recognition with imbalanced data of Mandarin and sub-dialects. Serv. Oriented Comput. Appl. 18 (2) (2024)
Senmao Ye, Huan Wang, Mingkui Tan, Fei Liu
Recurrent Affine Transformation for Text-to-Image Synthesis. IEEE Trans. Multim. 26 (2024)
Mostafa Herajy, Fei Liu, Monika Heiner
Design patterns for the construction of computational biological models. Briefings Bioinform. 25 (4) (2024)
Haizhi Yang, Tengyun Wang, Xiaoli Tang, Han Yu, Fei Liu, Hengjie Song
Dynamically Optimizing Display Advertising Profits Under Diverse Budget Settings. IEEE Trans. Knowl. Data Eng. 35 (1) (2023)
Fei Liu, Monika Heiner, David R. Gilbert
Hybrid modelling of biological systems: current progress and future prospects. Briefings Bioinform. 23 (3) (2022)
Fei Liu, Ena Yamamoto, Katsunobu Shirahama, Tsubasa Saitoh, Shuhei Aoyama, Yumiko Harada, Ryutaro Murakami, Hiroshi Matsuno
Analysis of Pattern Formation by Colored Petri Nets With Quantitative Regulation of Gene Expression Level. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (1) (2022)
George Assaf, Monika Heiner, Fei Liu
Coloured fuzzy Petri nets for modelling and analysing membrane systems. Biosyst. 212 (2022)
Hiroshi Matsuno, Fei Liu, Ming Chen
Editorial: Petri nets for cellular process modelling. Biosyst. 212 (2022)
Fei Liu, Wujie Sun, Monika Heiner, David R. Gilbert
Hybrid modelling of biological systems using fuzzy continuous Petri nets. Briefings Bioinform. 22 (1) (2021)
Fei Liu, George Assaf, Ming Chen, Monika Heiner
A Petri nets-based framework for whole-cell modeling. Biosyst. 210 (2021)
George Assaf, Monika Heiner, Fei Liu
Colouring fuzziness for systems biology. Theor. Comput. Sci. 875 (2021)
Fei Liu, Monika Heiner, David R. Gilbert
Fuzzy Petri nets for modelling of uncertain biological systems. Briefings Bioinform. 21 (1) (2020)
Martin Schwarick, Christian Rohr, Fei Liu, George Assaf, Jacek Chodak, Monika Heiner
Efficient Unfolding of Coloured Petri Nets Using Interval Decision Diagrams. Petri Nets (2020)
Fei Liu, Monika Heiner, David R. Gilbert
Coloured Petri nets for multilevel, multiscale and multidimensional modelling of biological systems. Briefings Bioinform. 20 (3) (2019)
George Assaf, Monika Heiner, Fei Liu
Biochemical Reaction Networks with Fuzzy Kinetic Parameters in Snoopy. CMSB (2019)
Mostafa Herajy, Fei Liu, Christian Rohr, Monika Heiner
Coloured Hybrid Petri Nets: An adaptable modelling approach for multi-scale biological networks. Comput. Biol. Chem. 76 (2018)
Deshun Sun, Siyuan Chen, Fei Liu, Jizhuang Fan
Dynamics of a Stochastic Virus Infection Model with Delayed Immune Response. ICIC (2) (2018)
Fei Liu, Siyuan Chen, Monika Heiner, Hengjie Song
Modeling biological systems with uncertain kinetic data using fuzzy continuous Petri nets. BMC Syst. Biol. 12 (4) (2018)
Fei Liu, Deshun Sun, Ryutaro Murakami, Hiroshi Matsuno
Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine. BMC Syst. Biol. 11 (S-4) (2017)
Mostafa Herajy, Fei Liu, Christian Rohr, Monika Heiner
Snoopy's hybrid simulator: a tool to construct and simulate hybrid biological models. BMC Syst. Biol. 11 (1) (2017)
Fei Liu, Monika Heiner, Ming Yang
Representing network reconstruction solutions with colored Petri nets. Neurocomputing 174 (2016)
Ovidiu Parvu, David R. Gilbert, Monika Heiner, Fei Liu, Nigel J. Saunders, Simon Shaw
Spatial-Temporal Modelling and Analysis of Bacterial Colonies with Phase Variable Genes. ACM Trans. Model. Comput. Simul. 25 (2) (2015)
Fei Liu, Ming Yang
Compositional colored Petri net approach to multiscale modeling for systems biology. Int. J. Model. Simul. Sci. Comput. 5 (4) (2014)
Mostafa Herajy, Fei Liu, Christian Rohr
Coloured hybrid Petri nets for systems biology. BioPPN@Petri Nets (2014)
Fei Liu, Mary Ann Blätke, Monika Heiner, Ming Yang
Modelling and simulating reaction-diffusion systems using coloured Petri nets. Comput. Biol. Medicine 53 (2014)
Ovidiu Parvu, David R. Gilbert, Monika Heiner, Fei Liu, Nigel J. Saunders
Modelling and Analysis of Phase Variation in Bacterial Colony Growth. CMSB (2013)
David R. Gilbert, Monika Heiner, Fei Liu, Nigel J. Saunders
Colouring Space - A Coloured Framework for Spatial Modelling in Systems Biology. Petri Nets (2013)
Fei Liu, Monika Heiner
Modeling membrane systems using colored stochastic Petri nets. Nat. Comput. 12 (4) (2013)
Qian Gao, David R. Gilbert, Monika Heiner, Fei Liu, Daniele Maccagnola, David Tree
Multiscale Modeling and Analysis of Planar Cell Polarity in the Drosophila Wing. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (2) (2013)
Fei Liu, Monika Heiner, Ming Yang
An efficient method for unfolding colored Petri nets. WSC (2012)
Monika Heiner, Mostafa Herajy, Fei Liu, Christian Rohr, Martin Schwarick
Snoopy - A Unifying Petri Net Tool. Petri Nets (2012)
Qian Gao, Fei Liu, David R. Gilbert, Monika Heiner, David Tree
A multiscale approach to modelling planar cell polarity in Drosophila wing using hierarchically coloured Petri nets. CMSB (2011)
Fei Liu, Monika Heiner
Colored Petri nets to Model and Simulate Biological Systems. ACSD/Petri Nets Workshops (2010)
Fei Liu, Monika Heiner
Computation of Enabled Transition Instances for Colored Petri Nets. AWPN (2010)
Fei Liu, Ming Yang
An Optimal Design Method for Simulation Verification, Validation and Accreditation Schemes. Simul. 85 (6) (2009)
Peng Shi, Fei Liu, Ming Yang, Zicai Wang
A Fuzzy Rules-Based Approach to Analyzing Human Behavior Models. UKSim (2009)
Peng Shi, Fei Liu, Ming Yang
Quantify Simulation Verification and Validation. UKSim (2009)
Fei Liu, Ming Yang, Guobing Sun
Verification of Human Decision Models in Military Simulations. Asia International Conference on Modelling and Simulation (2007)
Fei Liu, Ming Yang
Verification and Validation of Artificial Neural Network Models. Australian Conference on Artificial Intelligence (2005)
Fei Liu, Ming Yang, Zicai Wang
Study on simulation credibility metrics. WSC (2005)