Emanuele Giaquinta

Publication Activity (10 Years)

Years Active: 2008-2019
Publications (10 Years): 8

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Top Venues

Inf. Process. Lett.

J. Comput. Biol.

Int. J. Found. Comput. Sci.

Publications

Georgios Zacharopoulos, Lorenzo Ferretti, Emanuele Giaquinta, Giovanni Ansaloni, Laura Pozzi
RegionSeeker: Automatically Identifying and Selecting Accelerators From Application Source Code. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 38 (4) (2019)
Sukhpal Singh Ghuman, Emanuele Giaquinta, Jorma Tarhio
Lyndon Factorization Algorithms for Small Alphabets and Run-Length Encoded Strings. Algorithms 12 (6) (2019)
Jorma Tarhio, Jan Holub, Emanuele Giaquinta
Technology beats algorithms (in exact string matching). Softw. Pract. Exp. 47 (12) (2017)
Jorma Tarhio, Jan Holub, Emanuele Giaquinta
Technology Beats Algorithms (in Exact String Matching). CoRR (2016)
Emanuele Giaquinta
Run-Length Encoded Nondeterministic KMP and Suffix Automata. CIAA (2015)
Tomás Flouri, Emanuele Giaquinta, Kassian Kobert, Esko Ukkonen
Longest common substrings with k mismatches. Inf. Process. Lett. 115 (6-8) (2015)
Emanuele Giaquinta, Anadi Mishra, Laura Pozzi
Maximum Convex Subgraphs Under I/O Constraint for Automatic Identification of Custom Instructions. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 34 (3) (2015)
Tamanna Chhabra, Emanuele Giaquinta, Jorma Tarhio
Filtration Algorithms for Approximate Order-Preserving Matching. SPIRE (2015)
Sukhpal Singh Ghuman, Emanuele Giaquinta, Jorma Tarhio
Alternative Algorithms for Lyndon Factorization. Stringology (2014)
Tomás Flouri, Emanuele Giaquinta, Kassian Kobert, Esko Ukkonen
Longest common substrings with k mismatches. CoRR (2014)
Kimmo Fredriksson, Emanuele Giaquinta
On a compact encoding of the swap automaton. Inf. Process. Lett. 114 (7) (2014)
Emanuele Giaquinta
Run-Length Encoded Nondeterministic KMP and Suffix Automata. CoRR (2014)
Sukhpal Singh Ghuman, Emanuele Giaquinta, Jorma Tarhio
Alternative Algorithms for Lyndon Factorization. CoRR (2014)
Emanuele Giaquinta, Kimmo Fredriksson, Szymon Grabowski, Alexandru I. Tomescu, Esko Ukkonen
Motif matching using gapped patterns. Theor. Comput. Sci. 548 (2014)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
Text searching allowing for inversions and translocations of factors. Discret. Appl. Math. 163 (2014)
Emanuele Giaquinta, Laura Pozzi
An Effective Exact Algorithm and a New Upper Bound for the Number of Contacts in the Hydrophobic-Polar Two-Dimensional Lattice Model. J. Comput. Biol. 20 (8) (2013)
Ferdinando Cicalese, Travis Gagie, Emanuele Giaquinta, Eduardo Sany Laber, Zsuzsanna Lipták, Romeo Rizzi, Alexandru I. Tomescu
Indexes for Jumbled Pattern Matching in Strings, Trees and Graphs CoRR (2013)
Emanuele Giaquinta, Szymon Grabowski, Esko Ukkonen
Fast Matching of Transcription Factor Motifs Using Generalized Position Weight Matrix Models. J. Comput. Biol. 20 (9) (2013)
Emanuele Giaquinta, Kimmo Fredriksson, Szymon Grabowski, Alexandru I. Tomescu, Esko Ukkonen
Motif matching using gapped patterns. CoRR (2013)
Emanuele Giaquinta, Kimmo Fredriksson, Szymon Grabowski, Esko Ukkonen
Motif Matching Using Gapped Patterns. IWOCA (2013)
Kimmo Fredriksson, Emanuele Giaquinta
On a compact encoding of the swap automaton. CoRR (2013)
Emanuele Giaquinta, Szymon Grabowski, Kimmo Fredriksson
Approximate pattern matching with k-mismatches in packed text. Inf. Process. Lett. 113 (19-21) (2013)
Ferdinando Cicalese, Travis Gagie, Emanuele Giaquinta, Eduardo Sany Laber, Zsuzsanna Lipták, Romeo Rizzi, Alexandru I. Tomescu
Indexes for Jumbled Pattern Matching in Strings, Trees and Graphs. SPIRE (2013)
Emanuele Giaquinta, Szymon Grabowski
New algorithms for binary jumbled pattern matching. Inf. Process. Lett. 113 (14-16) (2013)
Emanuele Giaquinta, Szymon Grabowski
New algorithms for binary jumbled pattern matching CoRR (2012)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
On the bit-parallel simulation of the nondeterministic Aho-Corasick and suffix automata for a set of patterns. J. Discrete Algorithms 11 (2012)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
Adapting Boyer-Moore-like Algorithms for Searching Huffman Encoded Texts. Int. J. Found. Comput. Sci. 23 (2) (2012)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
A compact representation of nondeterministic (suffix) automata for the bit-parallel approach. Inf. Comput. 213 (2012)
Emanuele Giaquinta, Szymon Grabowski, Kimmo Fredriksson
Approximate pattern matching with k-mismatches in packed text CoRR (2012)
Matteo Campanelli, Domenico Cantone, Simone Faro, Emanuele Giaquinta
Pattern Matching with Swaps in Practice. Int. J. Found. Comput. Sci. 23 (2) (2012)
Szymon Grabowski, Simone Faro, Emanuele Giaquinta
String matching with inversions and translocations in linear average time (most of the time). Inf. Process. Lett. 111 (11) (2011)
Szymon Grabowski, Simone Faro, Emanuele Giaquinta
String Matching with Inversions and Translocations in Linear Average Time (Most of the Time) CoRR (2010)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
Approximate String Matching Allowing for Inversions and Translocations. Stringology (2010)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
A Compact Representation of Nondeterministic (Suffix) Automata for the Bit-Parallel Approach. CPM (2010)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
: Getting to the Next Level of Parallelism. FUN (2010)
Matteo Campanelli, Domenico Cantone, Simone Faro, Emanuele Giaquinta
An Efficient Algorithm for Approximate Pattern Matching with Swaps. Stringology (2009)
Domenico Cantone, Simone Faro, Emanuele Giaquinta
Adapting Boyer-Moore-Like Algorithms for Searching Huffman Encoded Texts. Stringology (2009)
Domenico Cantone, Salvatore Cristofaro, Simone Faro, Emanuele Giaquinta
Finite State Models for the Generation of Large Corpora of Natural Language Texts. FSMNLP (2008)