Fast Matching of Transcription Factor Motifs Using Generalized Position Weight Matrix Models.

Emanuele Giaquinta Szymon Grabowski Esko Ukkonen

Published in: J. Comput. Biol. (2013)

Keyphrases

weight matrix
weight matrices
transcription factors
binding sites
probabilistic model
microarray
gene expression
dna sequences
dna binding
motif discovery
genome wide
graph matching
markov models
information retrieval
matching algorithm
random walk
email
high dimensional
bayesian networks