Edward J. O'Brien

Publication Activity (10 Years)

Years Active: 2014-2019
Publications (10 Years): 7

Top Topics

High Throughput

Database Processing

Gene Expression

Top Venues

PLoS Comput. Biol.

Lang. Linguistics Compass

BMC Syst. Biol.

Publications

Colton J. Lloyd, Zachary A. King, Troy E. Sandberg, Ying Hefner, Connor A. Olson, Patrick V. Phaneuf, Edward J. O'Brien, Jon G. Sanders, Rodolfo A. Salido, Karenina Sanders, Caitriona Brennan, Gregory Humphrey, Rob Knight, Adam M. Feist
The genetic basis for adaptation of model-designed syntrophic co-cultures. PLoS Comput. Biol. 15 (3) (2019)
Chuankai Cheng, Edward J. O'Brien, Douglas McCloskey, Jose Utrilla, Connor A. Olson, Ryan A. LaCroix, Troy E. Sandberg, Adam M. Feist, Bernhard O. Palsson, Zachary A. King
Laboratory evolution reveals a two-dimensional rate-yield tradeoff in microbial metabolism. PLoS Comput. Biol. 15 (6) (2019)
Colton J. Lloyd, Ali Ebrahim, Laurence Yang, Zachary A. King, Edward Catoiu, Edward J. O'Brien, Joanne K. Liu, Bernhard O. Palsson
COBRAme: A computational framework for genome-scale models of metabolism and gene expression. PLoS Comput. Biol. 14 (7) (2018)
Anne E. Cook, Edward J. O'Brien
Fundamentals of inferencing during reading. Lang. Linguistics Compass 11 (7) (2017)
Sarah C. Dean, Wei Wei, Anne E. Cook, Edward J. O'Brien
Teaching & Learning Guide for: Fundamentals of inferencing during reading. Lang. Linguistics Compass 11 (9) (2017)
Edward J. O'Brien, Jose Utrilla, Bernhard O. Palsson
Quantification and Classification of E. coli Proteome Utilization and Unused Protein Costs across Environments. PLoS Comput. Biol. 12 (6) (2016)
Elizabeth Brunk, Nathan Mih, Jonathan Monk, Zhen Zhang, Edward J. O'Brien, Spencer E. Bliven, Ke Chen, Roger L. Chang, Philip E. Bourne, Bernhard O. Palsson
Systems biology of the structural proteome. BMC Syst. Biol. 10 (2016)
Joanne K. Liu, Edward J. O'Brien, Joshua A. Lerman, Karsten Zengler, Bernhard O. Palsson, Adam M. Feist
Reconstruction and modeling protein translocation and compartmentalization in Escherichia coli at the genome-scale. BMC Syst. Biol. 8 (2014)