Dongjun Chung

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 15

Top Topics

Ensemble Pruning

Medical Literature

Incorporating Prior Knowledge

Top Venues

PLoS Comput. Biol.

Publications

Zinat Ara, Amrita Ganguly, Donna Peppard, Dongjun Chung, Slobodan Vucetic, Vivian Genaro Motti, Sungsoo Ray Hong
Collaborative Job Seeking for People with Autism: Challenges and Design Opportunities. CoRR (2024)
Sungsoo Ray Hong, Marcos Zampieri, Brittany N. Hand, Vivian Motti, Dongjun Chung, Özlem Uzuner
Collaborative Design for Job-Seekers with Autism: A Conceptual Framework for Future Research. CoRR (2024)
Zinat Ara, Amrita Ganguly, Donna Peppard, Dongjun Chung, Slobodan Vucetic, Vivian Genaro Motti, Sungsoo Ray Hong
Collaborative Job Seeking for People with Autism: Challenges and Design Opportunities. CHI (2024)
Yeseul Jeon, Jina Park, Ick-Hoon Jin, Dongjun Chung
Network-based Topic Structure Visualization. CoRR (2024)
Aastha Khatiwada, Ayse Selen Yilmaz, Bethany J. Wolf, Maciej Pietrzak, Dongjun Chung
multi-GPA-Tree: Statistical approach for pleiotropy informed and functional annotation tree guided prioritization of GWAS results. PLoS Comput. Biol. 19 (12) (2023)
Zhaoqian Liu, Qi Wang, Anjun Ma, Shaohong Feng, Dongjun Chung, Jing Zhao, Qin Ma, Bingqiang Liu
Inference of disease-associated microbial gene modules based on metagenomic and metatranscriptomic data. Comput. Biol. Medicine 165 (2023)
Juan Xie, Hyeongseon Jeon, Gang Xin, Qin Ma, Dongjun Chung
LRT: Integrative analysis of scRNA-seq and scTCR-seq data to investigate clonal differentiation heterogeneity. PLoS Comput. Biol. 19 (7) (2023)
Aastha Khatiwada, Bethany J. Wolf, Ayse Selen Yilmaz, Paula S. Ramos, Maciej Pietrzak, Andrew Lawson, Kelly J. Hunt, Hang J. Kim, Dongjun Chung
GPA-Tree: statistical approach for functional-annotation-tree-guided prioritization of GWAS results. Bioinform. 38 (4) (2022)
Yeseul Jeon, Dongjun Chung, Jina Park, Ick-Hoon Jin
Graph-based Trajectory Visualization for Text Mining of COVID-19 Biomedical Literature. CoRR (2021)
Yuzhou Chang, Carter Allen, Changlin Wan, Dongjun Chung, Chi Zhang, Zihai Li, Qin Ma
IRIS-FGM: an integrative single-cell RNA-Seq interpretation system for functional gene module analysis. Bioinform. 37 (18) (2021)
Jin Hyun Nam, Daniel Couch, Willian A. da Silveira, Zhenning Yu, Dongjun Chung
PALMER: improving pathway annotation based on the biomedical literature mining with a constrained latent block model. BMC Bioinform. 21 (1) (2020)
Jaime Lynn Speiser, Bethany J. Wolf, Dongjun Chung, Constantine J. Karvellas, David G. Koch, Valerie L. Durkalski
BiMM tree: a decision tree method for modeling clustered and longitudinal binary outcomes. Commun. Stat. Simul. Comput. 49 (4) (2020)
Jaime Lynn Speiser, Constantine J. Karvellas, Bethany J. Wolf, Dongjun Chung, David G. Koch, Valerie L. Durkalski
Predicting daily outcomes in acetaminophen-induced acute liver failure patients with machine learning techniques. Comput. Methods Programs Biomed. 175 (2019)
Hang J. Kim, Zhenning Yu, Andrew Lawson, Hongyu Zhao, Dongjun Chung
Improving SNP prioritization and pleiotropic architecture estimation by incorporating prior knowledge using graph-GPA. Bioinform. 34 (12) (2018)
Dongjun Chung, Hang J. Kim, Hongyu Zhao
graph-GPA: A graphical model for prioritizing GWAS results and investigating pleiotropic architecture. PLoS Comput. Biol. 13 (2) (2017)
Dongjun Chung, Hyunjoong Kim
Accurate ensemble pruning with PL-bagging. Comput. Stat. Data Anal. 83 (2015)
Dongjun Chung, Dan Park, Kevin Myers, Jeffrey Grass, Patricia Kiley, Robert Landick, Sündüz Keles
dPeak: High Resolution Identification of Transcription Factor Binding Sites from PET and SET ChIP-Seq Data. PLoS Comput. Biol. 9 (10) (2013)
Dongjun Chung, Hyunjoong Kim
Robust classification ensemble method for microarray data. Int. J. Data Min. Bioinform. 5 (5) (2011)
Dongjun Chung, Pei Fen Kuan, Bo Li, Rajendran Sanalkumar, Kun Liang, Emery H. Bresnick, Colin N. Dewey, Sündüz Keles
Discovering Transcription Factor Binding Sites in Highly Repetitive Regions of Genomes with Multi-Read Analysis of ChIP-Seq Data. PLoS Comput. Biol. 7 (7) (2011)