Cyrus Chothia

Publication Activity (10 Years)

Years Active: 1997-2015
Publications (10 Years): 1

Top Topics

Face To Face Collaborative Learning

Computational Biology

Genomic Sequences

Protein Structure

Top Venues

Nucleic Acids Res.

Publications

Tony E. Lewis, Ian Sillitoe, Antonina Andreeva, Tom L. Blundell, Daniel W. A. Buchan, Cyrus Chothia, Domenico Cozzetto, Jose M. Dana, Ioannis Filippis, Julian Gough, David T. Jones, Lawrence A. Kelley, Gerard J. Kleywegt, Federico Minneci, Jaina Mistry, Alexey G. Murzin, Bernardo Ochoa-Montaño, Matt E. Oates, Marco Punta, Owen J. L. Rackham, Jonathan Stahlhacke, Michael J. E. Sternberg, Sameer Velankar, Christine A. Orengo
Genome3D: exploiting structure to help users understand their sequences. Nucleic Acids Res. 43 (Database-Issue) (2015)
Antonina Andreeva, Dave Howorth, Cyrus Chothia, Eugene Kulesha, Alexey G. Murzin
SCOP2 prototype: a new approach to protein structure mining. Nucleic Acids Res. 42 (Database-Issue) (2014)
Tony E. Lewis, Ian Sillitoe, Antonina Andreeva, Tom L. Blundell, Daniel W. A. Buchan, Cyrus Chothia, Alison L. Cuff, Jose M. Dana, Ioannis Filippis, Julian Gough, Sarah Hunter, David T. Jones, Lawrence A. Kelley, Gerard J. Kleywegt, Federico Minneci, Alex L. Mitchell, Alexey G. Murzin, Bernardo Ochoa-Montaño, Owen J. L. Rackham, James Smith, Michael J. E. Sternberg, Sameer Velankar, Corin Yeats, Christine A. Orengo
Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. Nucleic Acids Res. 41 (Database-Issue) (2013)
David A. de Lima Morais, Hai Fang, Owen J. L. Rackham, Derek Wilson, Ralph Pethica, Cyrus Chothia, Julian Gough
SUPERFAMILY 1.75 including a domain-centric gene ontology method. Nucleic Acids Res. 39 (Database-Issue) (2011)
Derek Wilson, Ralph Pethica, Yiduo Zhou, Charles Talbot, Christine Vogel, Martin Madera, Cyrus Chothia, Julian Gough
SUPERFAMILY - sophisticated comparative genomics, data mining, visualization and phylogeny. Nucleic Acids Res. 37 (Database-Issue) (2009)
Antonina Andreeva, Dave Howorth, John-Marc Chandonia, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin
Data growth and its impact on the SCOP database: new developments. Nucleic Acids Res. 36 (Database-Issue) (2008)
Derek Wilson, Martin Madera, Christine Vogel, Cyrus Chothia, Julian Gough
The SUPERFAMILY database in 2007: families and functions. Nucleic Acids Res. 35 (Database-Issue) (2007)
Emmanuel D. Levy, José B. Pereira-Leal, Cyrus Chothia, Sarah A. Teichmann
3D Complex: A Structural Classification of Protein Complexes. PLoS Comput. Biol. 2 (11) (2006)
Christine Vogel, Cyrus Chothia
Protein Family Expansions and Biological Complexity. PLoS Comput. Biol. 2 (5) (2006)
Antonina Andreeva, Dave Howorth, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin
SCOP database in 2004: refinements integrate structure and sequence family data. Nucleic Acids Res. 32 (Database-Issue) (2004)
Martin Madera, Christine Vogel, Sarah K. Kummerfeld, Cyrus Chothia, Julian Gough
The SUPERFAMILY database in 2004: additions and improvements. Nucleic Acids Res. 32 (Database-Issue) (2004)
Loredana Lo Conte, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin
SCOP database in 2002: refinements accommodate structural genomics. Nucleic Acids Res. 30 (1) (2002)
Julian Gough, Cyrus Chothia
SUPERFAMILY: HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments. Nucleic Acids Res. 30 (1) (2002)
Jong Park, Liisa Holm, Cyrus Chothia
Sequence search algorithm assessment and testing toolkit (SAT). Bioinform. 16 (2) (2000)
Loredana Lo Conte, Bart Ailey, Tim J. P. Hubbard, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia
SCOP: a Structural Classification of Proteins database. Nucleic Acids Res. 28 (1) (2000)
Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong Park
Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISL. Bioinform. 16 (2) (2000)
Ognyan Stoyanov, Alexander Kister, Israel M. Gelfand, Casimir A. Kulikowski, Cyrus Chothia
Geometric Invariant Core for the CL and CH1 Domains of Immunoglobulin Molecules. J. Comput. Biol. 7 (5) (2000)
Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong Park
PDB_ISL: an intermediate sequence library for protein structure assignment. RECOMB (2000)
Jong Park, Liisa Holm, Andreas Heger, Cyrus Chothia
RSDB: representative protein sequence databases have high information content. Bioinform. 16 (5) (2000)
Tim J. P. Hubbard, Bart Ailey, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia
SCOP: a Structural Classification of Proteins database. Nucleic Acids Res. 27 (1) (1999)
Sarah A. Teichmann, Jong Park, Cyrus Chothia
Genome sequences and protein structures. RECOMB (1999)
Tim J. P. Hubbard, Alexey G. Murzin, Steven E. Brenner, Cyrus Chothia
SCOP: a structural classification of proteins database. Nucleic Acids Res. 25 (1) (1997)