Andreas Heger

Publication Activity (10 Years)

Years Active: 2000-2019
Publications (10 Years): 1

Top Topics

Protein Families

Top Venues

Nucleic Acids Res.

Publications

Adam P. Cribbs, Sebastian Luna-Valero, Charlotte George, Ian M. Sudbery, Antonio J. Berlanga-Taylor, Stephen N. Sansom, Tom Smith, Nicholas E. Ilott, Jethro S. Johnson, Jakub Scaber, Katherine Brown, David Sims, Andreas Heger
CGAT-core: a python framework for building scalable, reproducible computational biology workflows. F1000Research 8 (2019)
Robert D. Finn, Alex Bateman, Jody Clements, Penelope Coggill, Ruth Y. Eberhardt, Sean R. Eddy, Andreas Heger, Kirstie Hetherington, Liisa Holm, Jaina Mistry, Erik L. L. Sonnhammer, John G. Tate, Marco Punta
Pfam: the protein families database. Nucleic Acids Res. 42 (Database-Issue) (2014)
David Sims, Nicholas E. Ilott, Stephen N. Sansom, Ian M. Sudbery, Jethro S. Johnson, Katherine A. Fawcett, Antonio J. Berlanga-Taylor, Sebastian Luna-Valero, Chris P. Ponting, Andreas Heger
CGAT: computational genomics analysis toolkit. Bioinform. 30 (9) (2014)
Andreas Heger, Caleb Webber, Martin Goodson, Chris P. Ponting, Gerton Lunter
GAT: a simulation framework for testing the association of genomic intervals. Bioinform. 29 (16) (2013)
Marco Punta, Penny C. Coggill, Ruth Y. Eberhardt, Jaina Mistry, John G. Tate, Chris Boursnell, Ningze Pang, Kristoffer Forslund, Goran Ceric, Jody Clements, Andreas Heger, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman, Robert D. Finn
The Pfam protein families database. Nucleic Acids Res. 40 (Database-Issue) (2012)
Robert D. Finn, Jaina Mistry, John G. Tate, Penny C. Coggill, Andreas Heger, Joanne E. Pollington, O. Luke Gavin, Prasad Gunasekaran, Goran Ceric, Kristoffer Forslund, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman
The Pfam protein families database. Nucleic Acids Res. 38 (Database-Issue) (2010)
Andreas Heger, Eija Korpelainen, Taavi Hupponen, Kimmo Mattila, Vesa Ollikainen, Liisa Holm
PairsDB atlas of protein sequence space. Nucleic Acids Res. 36 (Database-Issue) (2008)
Andreas Heger, Chris P. Ponting
OPTIC: orthologous and paralogous transcripts in clades. Nucleic Acids Res. 36 (Database-Issue) (2008)
Andreas Heger, Swapan Mallick, Christopher Andrew Wilton, Liisa Holm
The global trace graph, a novel paradigm for searching protein sequence databases. Bioinform. 23 (18) (2007)
Andreas Heger, Christopher Andrew Wilton, Ashwin Sivakumar, Liisa Holm
ADDA: a domain database with global coverage of the protein universe. Nucleic Acids Res. 33 (Database-Issue) (2005)
Andreas Heger, Michael Lappe, Liisa Holm
Accurate Detection of Very Sparse Sequence Motifs. J. Comput. Biol. 11 (5) (2004)
Andreas Heger, Michael Lappe, Liisa Holm
Accurate detection of very sparse sequence motifs. RECOMB (2003)
Andreas Heger, Liisa Holm
Sensitive pattern discovery with 'fuzzy' alignments of distantly related proteins. ISMB (Supplement of Bioinformatics) (2003)
Andreas Heger, Liisa Holm
Picasso: generating a covering set of protein family profiles. Bioinform. 17 (3) (2001)
Sabine Dietmann, Jong Park, Cédric Notredame, Andreas Heger, Michael Lappe, Liisa Holm
A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3. Nucleic Acids Res. 29 (1) (2001)
Jong Park, Sabine Dietmann, Andreas Heger, Liisa Holm
Estimating the significance of sequence order in protein secondary structure and prediction. Bioinform. 16 (11) (2000)
Jong Park, Liisa Holm, Andreas Heger, Cyrus Chothia
RSDB: representative protein sequence databases have high information content. Bioinform. 16 (5) (2000)