John-Marc Chandonia

Publication Activity (10 Years)

Years Active: 2002-2022
Publications (10 Years): 2

Top Topics

Machine Learning

Top Venues

Nucleic Acids Res.

Publications

John-Marc Chandonia, Lindsey Guan, Shiangyi Lin, Changhua Yu, Naomi K. Fox, Steven E. Brenner
SCOPe: improvements to the structural classification of proteins - extended database to facilitate variant interpretation and machine learning. Nucleic Acids Res. 50 (D1) (2022)
John-Marc Chandonia, Naomi K. Fox, Steven E. Brenner
SCOPe: classification of large macromolecular structures in the structural classification of proteins - extended database. Nucleic Acids Res. 47 (Database-Issue) (2019)
Naomi K. Fox, Steven E. Brenner, John-Marc Chandonia
SCOPe: Structural Classification of Proteins - extended, integrating SCOP and ASTRAL data and classification of new structures. Nucleic Acids Res. 42 (Database-Issue) (2014)
Y. Wayne Huang, Adam P. Arkin, John-Marc Chandonia
WIST: toolkit for rapid, customized LIMS development. Bioinform. 27 (3) (2011)
Antonina Andreeva, Dave Howorth, John-Marc Chandonia, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin
Data growth and its impact on the SCOP database: new developments. Nucleic Acids Res. 36 (Database-Issue) (2008)
John-Marc Chandonia
StrBioLib: a Java library for development of custom computational structural biology applications. Bioinform. 23 (15) (2007)
Andrew Smith, John-Marc Chandonia, Steven E. Brenner
ANDY: a general, fault-tolerant tool for database searching on computer clusters. Bioinform. 22 (5) (2006)
Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, Stephen R. Holbrook
Comparative mapping of sequence-based and structure-based protein domains. BMC Bioinform. 6 (2005)
John-Marc Chandonia, Gary Chung Hon, Nigel S. Walker, Loredana Lo Conte, Patrice Koehl, Michael Levitt, Steven E. Brenner
The ASTRAL Compendium in 2004. Nucleic Acids Res. 32 (Database-Issue) (2004)
John-Marc Chandonia, Nigel S. Walker, Loredana Lo Conte, Patrice Koehl, Michael Levitt, Steven E. Brenner
ASTRAL compendium enhancements. Nucleic Acids Res. 30 (1) (2002)