Cynthia Brandt

Publication Activity (10 Years)

Years Active: 1997-2022
Publications (10 Years): 38

Top Topics

Language Processing

Clinical Decision Support

Ensemble Clustering

Top Venues

J. Am. Medical Informatics Assoc.

Publications

A. Ram, Clair A. Kronk, Jacob Eleazer, Joseph L. Goulet, Cynthia Brandt, Karen H. Wang
Transphobia, encoded: an examination of trans-specific terminology in SNOMED CT and ICD-10-CM. J. Am. Medical Informatics Assoc. 29 (2) (2022)
Terika McCall, Stephanie Date, Dorothy Alexis, Stephanie Whiteman, Salihah Dick, Luis N. Marenco, Meredith Campbell Britton, Baylah Tessier-Sherman, Cynthia Brandt, Karen H. Wang
Towards Reducing Health Information Inequities in the Caribbean: The Eastern Caribbean Health Outcomes Research Network Data Sharing Platform Usability Study. MedInfo (2021)
Rachel Ramoni, Molly Klote, Sumitra Muralidhar, Cynthia Brandt, Maya A. Bernstein, Benjamin H. McMahon, Daniel A. Jacobson, Amy C. Justice
COVID-19 Insights Partnership: Leveraging big data from the Department of Veterans Affairs and supercomputers at the Department of Energy under the public health authority. J. Am. Medical Informatics Assoc. 28 (7) (2021)
Terri Elizabeth Workman, Joseph L. Goulet, Cynthia Brandt, Melissa Skanderson, Rixin Wang, Allison R. Warren, Jacob Eleazer, Kirsha Gordon, Qing Zeng-Treitler
A Prototype Application to Identify LGBT Patients in Clinical Notes. IEEE BigData (2020)
Barry Sly-Delgado, Meysam Ghaffari, Aastha Gunjan, Cynthia Brandt, Joseph L. Goulet, Karen H. Wang, Ashok Srinivasan
Leveraging Location Based Services for Analysis of Suicides in Rural Counties. AMIA (2020)
Michael E. Matheny, Stephen L. Luther, William T. Roddy, Cynthia Brandt, Joseph J. Erdos
Pain Management Collaboratory Coordinating Center (PMC3): Insights from Multiple Work Groups for Clinical Research Informatics Support. AMIA (2020)
Katherine Given Ligtenberg, David Chartash, Marcus Bosenberg, Cynthia Brandt
Validation of the Data Quality of a Tumor Board Registry Through Assessment of Clinicopathologic Survival Outcomes in Melanoma Patients. AMIA (2020)
David Chang, Ivana Balazevic, Carl Allen, Daniel Chawla, Cynthia Brandt, Richard Andrew Taylor
Benchmark and Best Practices for Biomedical Knowledge Graph Embeddings. CoRR (2020)
Brian C. Coleman, Samah J. Fodeh, Rixin Wang, Anthony J. Lisi, Alicia Heapy, Cynthia Brandt
Pain Assessment in Veterans Health Administration Chiropractic Clinic Documentation. AMIA (2020)
David Chang, Ivana Balazevic, Carl Allen, Daniel Chawla, Cynthia Brandt, Richard Andrew Taylor
Benchmark and Best Practices for Biomedical Knowledge Graph Embeddings. BioNLP (2020)
Kevin Lopez, Samah J. Fodeh, Ahmed Allam, Cynthia Brandt, Michael Krauthammer
Reducing Annotation Burden Through Multimodal Learning. Frontiers Big Data 3 (2020)
Terri Elizabeth Workman, Qing Zeng-Treitler, YiJun Shao, Joel Kupersmith, Friedhelm Sandbrink, Joseph L. Goulet, Nawar M. Shaar, Christopher Spevak, Cynthia Brandt, Marc R. Blackman
Explainable Deep Learning Applied to Understanding Opioid Use Disorder and Its Risk Factors. IEEE BigData (2019)
David Chartash, Hyung M. Paek, Bill K. Ross, Dziura James, Nogee Daniel, Eric Boccio, Cory Hines, Aaron M. Schott, Molly M. Jeffery, Mehul D. Patel, Timothy F. Platts-Mills, Osama M. Ahmed, Cynthia Brandt, Katherine C. Couturier, Edward R. Melnick
A Pragmatic Multi-system Opioid Use Disorder Computable Phenotype for the Emergency Department. AMIA (2019)
Tiffany I. Leung, Marion J. Ball, Cynthia Brandt, Gretchen P. Jackson, Titus K. Schleyer
The Nuts and Bolts of Sponsorship: Perspectives in Informatics. AMIA (2019)
Teresa O'Leary, June Weiss, Benjamin Toll, Cynthia Brandt, Steven Bernstein
Automated Generation of CONSORT Diagrams Using Relational Database Software. Appl. Clin. Inform. 10 (01) (2019)
Termeh Feinberg, Joseph L. Goulet, Amy C. Justice, Sameh J. Fodeh, Lori Bastian, Qing T. Zeng, Cynthia Brandt
Preliminary chart review for Natural Language Processing development among electronic health records with documentation of marijuana use. AMIA (2019)
Samah J. Fodeh, Jennifer Edelman, William Becker, Cynthia Brandt, Sally Haskell
Presecription opioid tapering: Mining structured and unstructured data. AMIA (2019)
Michael Concato, Charles Lu, Farah Kidwai, Cynthia Brandt, Kei Cheung
A Common Web Interface Provides Access to Clinical Databases Using REDCap and Python. AMIA (2018)
Samah Jamal Fodeh, Edwin D. Boudreaux, Rixin Wang, Dennis Silva, Robert Bossarte, Joseph L. Goulet, Cynthia Brandt, Al-Talib Hamada
Suicide Risk on Twitter. Int. J. Knowl. Discov. Bioinform. 8 (2) (2018)
Samah Jamal Fodeh, Dezon Finch, Lina Bouayad, Stephen L. Luther, Han Ling, Robert D. Kerns, Cynthia Brandt
Classifying clinical notes with pain assessment using machine learning. Medical Biol. Eng. Comput. 56 (7) (2018)
Karen H. Wang, Erica Moreira, Todd Kawecki, Amy C. Justice, Marcella Nunez-Smith, Cynthia Brandt, Nitu Kashyap
Notes from the Field: Real-World Clinical Information Exchange between Electronic Health Records. AMIA (2018)
Samah J. Fodeh, Dezon Finch, Lina Bouayad, Stephen Luther, Robert D. Kerns, Cynthia Brandt
Classifying Clinical Notes with Pain Assessment. MedInfo (2017)
Kathleen M. Akgün, Keith Sigel, Kei Cheung, Farah Kidwai-Khan, Alex K. Bryant, Cynthia Brandt, Amy C. Justice, Kristina Crothers
Phenotyping physiologic measurement of lung function in a large electronic health record using automated tools. AMIA (2017)
Samah J. Fodeh, Joseph L. Goulet, Cynthia Brandt, Al-Talib Hamada
Leveraging Twitter to better identify suicide risk. MIH@KDD (2017)
Jennifer H. Garvin, Megha Kalsy, Cynthia Brandt, Stephen L. Luther, Guy Divita, Gregory Coronado, Doug Redd, Carrie M. Christensen, Brent Hill, Natalie Kelly, Qing Zeng-Treitler
An Evolving Ecosystem for Natural Language Processing in Department of Veterans Affairs. J. Medical Syst. 41 (2) (2017)
Nallakkandi Rajeevan, Kristina M. Niehoff, Peter Charpentier, Forrest L. Levin, Amy Justice, Cynthia Brandt, Terri R. Fried, Perry L. Miller
Utilizing patient data from the veterans administration electronic health record to support web-based clinical decision support: informatics challenges and issues from three clinical domains. BMC Medical Informatics Decis. Mak. 17 (1) (2017)
Jennifer H. Garvin, Megha Kalsy, Cynthia Brandt, Stephen Luther, Guy Divita, Gregorio Coronado, Douglas Redd, Qing T. Zeng
An Evolving Ecosystem for Natural Language Processing in Department of Veterans Affairs. CRI (2017)
Roxanne Wadia, Mark A. Shifman, Forrest W. Levin, Luis N. Marenco, Cynthia Brandt, Kei-Hoi Cheung, Tamar H. Taddei, Michael Krauthammer
A Clinical Decision Support System for Monitoring Post-Colonoscopy Patient Follow-Up and Scheduling. CRI (2017)
Ruth M. Reeves, Marcus Verhagen, Cynthia Brandt, Wendy W. Chapman, Michael E. Matheny, Steven H. Brown, Brian Marx, Theodore Speroff
Event Coreference in Support of Temporal Reasoning in Mental Health Notes. AMIA (2016)
Jonathan Bates, Samah J. Fodeh, Cynthia Brandt, Julie A. Womack
Classification of radiology reports for falls in an HIV study cohort. J. Am. Medical Informatics Assoc. 23 (e1) (2016)
Douglas Redd, Qing T. Zeng, Cynthia Brandt, Kathleen Akgün
Improving Pain Assessment in Medical Intensive Care Unit Through Natural Language Processing. AMIA (2016)
Olga V. Patterson, Matthew Freiberg, Cynthia Brandt, Scott L. DuVall
Evaluation of UMLS Term Coverage for Echocardiogram Measures. AMIA (2016)
Jennifer M. Aucoin, Shon G. Michael, Amy Justice, Perry L. Miller, Cynthia Brandt, Huned Patwa
Automating Identification of OEF/OIF Veterans Diagnosed with ALS. AMIA (2015)
Amir Mohammad, Hamada Hamid, Cynthia Brandt
Improving Evidence-Based Migraine Management in VA Primary Care Clinics by Utilizing Informatics Tools. AMIA (2015)
Andrea L. Benin, Samah J. Fodeh, Michele Koss, Kyle Lee, Perry L. Miller, Cynthia Brandt
Using the Adverse Event Reporting System: Can Analysis be Streamlined by Text Processing? AMIA (2015)
Karen H. Wang, Constance Carroll, Brenda Fenton, Samah J. Fodeh, Joseph Erdos, Marcella Nunez-Smith, Amy Justice, Cynthia Brandt
Exploring Healthcare Mobility in the US to Improve Quality of Care: Preliminary Results. AMIA (2015)
Samah J. Fodeh, Cynthia Brandt, Perry L. Miller, Michele Koss, Andrea L. Benin
Feature Selection Based LapSVM to Classify Medical Event Reports and Enhance Patient Safety. AMIA (2015)
Samah Jamal Fodeh, Andrea L. Benin, Perry L. Miller, Kyle Lee, Michele Koss, Cynthia Brandt
Laplacian SVM Based Feature Selection Improves Medical Event Reports Classification. ICDM Workshops (2015)
Vijay Garla, Caroline Taylor, Cynthia Brandt
Semi-supervised clinical text classification with Laplacian SVMs: An application to cancer case management. J. Biomed. Informatics 46 (5) (2013)
Balaji Polepalli Ramesh, Thomas K. Houston, Cynthia Brandt, Hua Fang, Hong Yu
Improving Patients' Electronic Health Record Comprehension with NoteAid. MedInfo (2013)
Samah Jamal Fodeh, Maryan Zirkle, Dezon Finch, Ruth M. Reeves, Joseph Erdos, Cynthia Brandt
MedCat: A Framework for High Level Conceptualization of Medical Notes. ICDM Workshops (2013)
Vijay Garla, Cynthia Brandt
Knowledge-based biomedical word sense disambiguation: an evaluation and application to clinical document classification. J. Am. Medical Informatics Assoc. 20 (5) (2013)
Samah Jamal Fodeh, Cynthia Brandt, Thaibinh Luong, Ali Haddad, Martin H. Schultz, Terrence Murphy, Michael Krauthammer
Complementary ensemble clustering of biomedical data. J. Biomed. Informatics 46 (3) (2013)
Vijay Garla, Cynthia Brandt
Knowledge-Based Biomedical Word Sense Disambiguation: An Evaluation and Application to Clinical Document Classification. HISB (2012)
Vijay Garla, Cynthia Brandt
Ontology-guided feature engineering for clinical text classification. J. Biomed. Informatics 45 (5) (2012)
Jessica Ross, Maryan Zirkle, Cynthia Brandt, Jennifer H. Garvin, Stephen Luther, David Hickam
Developing a Terminology for PTSD Psychotherapeutic Modalities for use with Clinical Documents. AMIA (2012)
Michael Phipps, Hajime Tokuno, Nallakkandi Rajeevan, Forrest W. Levin, Sandra J. Frawley, Cynthia Brandt, Perry L. Miller
Towards a Clinically Efficient Model for Clinical Decision Support Linked to the VA EMR: A Pilot System for Neuropathic Pain. AMIA (2012)
Samah Jamal Fodeh, Ali Haddad, Cynthia Brandt, Martin H. Schultz, Michael Krauthammer
Enhancing Clustering by Exploiting Complementary Data Modalities in the Medical Domain. AIAI (1) (2012)
Vijay Garla, Cynthia Brandt
Semantic similarity in the biomedical domain: an evaluation across knowledge sources. BMC Bioinform. 13 (2012)
Samah J. Fodeh, Sharmila Chatterjee, Cynthia Brandt
Analysis of VA Telephone Call Notes using Topic Modeling. AMIA (2012)
Vijay Garla, Vincent Lo Re III, Zachariah Dorey-Stein, Farah Kidwai, Matthew Scotch, Julie A. Womack, Amy Justice, Cynthia Brandt
The Yale cTAKES extensions for document classification: architecture and application. J. Am. Medical Informatics Assoc. 18 (5) (2011)
Matthew Scotch, Mona Duggal, Cynthia Brandt, Zhenqui Lin, Richard N. Shiffman
Brief review: Use of statistical analysis in the biomedical informatics literature. J. Am. Medical Informatics Assoc. 17 (1) (2010)
Valentin Dinu, Prakash M. Nadkarni, Cynthia Brandt
Pivoting approaches for bulk extraction of Entity-Attribute-Value data. Comput. Methods Programs Biomed. 82 (1) (2006)
Hyung M. Paek, Janice Swiatek-Kelley, Ryan T. O'Connell, Cynthia Brandt
Qualitative Study of Patients' Perceptions of Safety and Risk Related to Electronic Health Records in a Hospital. AMIA (2006)
Richard N. Shiffman, Jane Dixon, Cynthia Brandt, Abdelwaheb Essaihi, Allen Hsiao, George Michel, Ryan T. O'Connell
The GuideLine Implementability Appraisal (GLIA): development of an instrument to identify obstacles to guideline implementation. BMC Medical Informatics Decis. Mak. 5 (2005)
Hyung M. Paek, Cynthia Brandt
Designing a Tracking System Based on Cognitive Theory of Error. AMIA (2005)
Cynthia Brandt, Charles Lu, Prakash M. Nadkarni
Automating Identification of Adverse Events Related to Abnormal Lab Results Using Standard Vocabularies. AMIA (2005)
Kexin Sun, Prakash M. Nadkarni, Cynthia Brandt
Metadata Driven Generation of Reports for Clinical Studies. AMIA (2005)
Stephanie Argraves, Cynthia Brandt, Roy Money, Prakash M. Nadkarni
Informatics Tools to Improve Clinical Research. AMIA (2005)
Andrea L. Benin, Harlan M. Krumholz, Eugene Shapiro, Cynthia Brandt
Validation of a System for Quality Improvement: Preliminary Data. AMIA (2005)
Cynthia Brandt, Rohit Gadagkar, Cesar Rodriguez, Prakash M. Nadkarni
Application of Information Technology: Managing Complex Change in Clinical Study Metadata. J. Am. Medical Informatics Assoc. 11 (5) (2004)
Mark A. Shifman, Ranjana Srivastava, Cynthia Brandt, Tong-Ruei Li, Kevin P. White, Perry L. Miller
Case Report: Exploring the Portability of Informatics Capabilities from a Clinical Application to a Bioscience Application. J. Am. Medical Informatics Assoc. 11 (4) (2004)
Cynthia Brandt, Aniruddha M. Deshpande, Charles Lu, Gowri Ananth, Kexin Sun, Rohit Gadagkar, Richard Morse, Cesar Rodriguez, Perry L. Miller, Prakash M. Nadkarni
TrialDB: A Web-based Clinical Study Data Management System AMIA 2003 Open Source Expo. AMIA (2003)
Dorothy B. Cohen, Sandra J. Frawley, Mark A. Shifman, Perry L. Miller, Cynthia Brandt
The Integration of Similar Clinical Research Data Collection Instruments. AMIA (2003)
Aniruddha M. Deshpande, Cynthia Brandt, Prakash M. Nadkarni
Temporal query of attribute-value patient data: utilizing the constraints of clinical studies. Int. J. Medical Informatics 70 (1) (2003)
Cynthia Brandt, Richard Morse, Keri Matthews, Kexin Sun, Aniruddha M. Deshpande, Rohit Gadagkar, Dorothy B. Cohen, Perry L. Miller, Prakash M. Nadkarni
Metadata-driven creation of data marts from an EAV-modeled clinical research database. Int. J. Medical Informatics 65 (3) (2002)
Aniruddha M. Deshpande, Cynthia Brandt, Prakash M. Nadkarni
Application of Information Technology: Metadata-driven Ad Hoc Query of Patient Data: Meeting the Needs of Clinical Studies. J. Am. Medical Informatics Assoc. 9 (4) (2002)
Cynthia Brandt, Prakash M. Nadkarni
Web-based UMLS concept retrieval by automatic text scanning: a comparison of two methods. Comput. Methods Programs Biomed. 64 (1) (2001)
Prakash M. Nadkarni, Roland Chen, Cynthia Brandt
Research Paper: UMLS Concept Indexing for Production Databases: A Feasibility Study. J. Am. Medical Informatics Assoc. 8 (1) (2001)
Sanjay K. Fernando, Cynthia Brandt, Prakash M. Nadkarni
Generation of pedigree diagrams for web display using scalable vector graphics from a clinical trials database. AMIA (2001)
Prakash M. Nadkarni, Cynthia Brandt, Luis N. Marenco
Application of Information Technology: WebEAV: Automatic Metadata-driven Generation of Web Interfaces to Entity-Attribute-Value Databases. J. Am. Medical Informatics Assoc. 7 (4) (2000)
Abha Agrawal, Cynthia Brandt, Richard N. Shiffman
Promoting Workflow Integration with Information Management Services and GEM-encoded Guidelines. AMIA (2000)
Richard N. Shiffman, Yischon Liaw, Cynthia Brandt, Geoffrey J. Corb
Review: Computer-based Guideline Implementation Systems: A Systematic Review of Functionality and Effectiveness. J. Am. Medical Informatics Assoc. 6 (2) (1999)
Richard N. Shiffman, Cynthia Brandt, Yischon Liaw, Geoffrey J. Corb
Model Formulation: A Design Model for Computer-based Guideline Implementation Based on Information Management Services. J. Am. Medical Informatics Assoc. 6 (2) (1999)
Cynthia Brandt, Prakash M. Nadkarni, Lee Schacter, Daniel Zelterman, Yuli Li, John M. Fisk, Edward K. Shultz, Perry L. Miller
ACT/DB: A Clinical Trials Database Being Refined on a Pilot Basis at Two Medical Centers. AMIA (1998)
Prakash M. Nadkarni, Cynthia Brandt, Sandra J. Frawley, Frederick G. Sayward, Robin Einbinder, Daniel Zelterman, Lee Schacter, Perry L. Miller
Application of Technology: Managing Attribute-Value Clinical Trials Data Using the ACT/DB Client-Server Database System. J. Am. Medical Informatics Assoc. 5 (2) (1998)
Perry L. Miller, Sandra J. Frawley, Cynthia Brandt, Frederick G. Sayward
A prototype Web site for immunization knowledge maintenance. AMIA (1997)
Cynthia Brandt, Lori A. Fernandes, Seth Powsner, Keith J. Ruskin, Perry L. Miller
Using Coded Semantic Relationships to Retrieve and Structure Clinical Reference Information. AMIA (1997)
Richard N. Shiffman, Cynthia Brandt, Maryrose Hoffman, Wanda Wiig, Lori A. Fernandes
SEURAT: Scanned Entry of Structured Data for a Pediatric Health Maintenance Record System. AMIA (1997)