Christopher S. Funk

Publication Activity (10 Years)

Years Active: 2012-2016
Publications (10 Years): 1

Top Topics

Journal Articles

Natural Language Processing

Top Venues

J. Biomed. Semant.

Pacific Symposium on Biocomputing

Publications

Christopher S. Funk, K. Bretonnel Cohen, Lawrence E. Hunter, Karin M. Verspoor
Gene Ontology synonym generation rules lead to increased performance in biomedical concept recognition. J. Biomed. Semant. 7 (2016)
Christopher S. Funk, Indika Kahanda, Asa Ben-Hur, Karin M. Verspoor
Evaluating a variety of text-mined features for automatic protein function prediction with GOstruct. J. Biomed. Semant. 6 (2015)
Christopher S. Funk, Lawrence E. Hunter, K. Bretonnel Cohen
Combining Heterogenous Data for Prediction of Disease Related and Pharmacogenes. Pacific Symposium on Biocomputing (2014)
Christopher S. Funk, William A. Baumgartner Jr., Benjamin Garcia, Christophe Roeder, Michael Bada, K. Bretonnel Cohen, Lawrence E. Hunter, Karin Verspoor
Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters. BMC Bioinform. 15 (2014)
Artem Sokolov, Christopher S. Funk, Kiley Graim, Karin Verspoor, Asa Ben-Hur
Combining heterogeneous data sources for accurate functional annotation of proteins. BMC Bioinform. 14 (S-3) (2013)
Karin Verspoor, Kevin Bretonnel Cohen, Arrick Lanfranchi, Colin Warner, Helen L. Johnson, Christophe Roeder, Jinho D. Choi, Christopher S. Funk, Yuriy Malenkiy, Miriam Eckert, Nianwen Xue, William A. Baumgartner Jr., Michael Bada, Martha Palmer, Lawrence E. Hunter
A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools. BMC Bioinform. 13 (2012)