Chirag J. Patel

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 15

Top Topics

Biomedical Data

Computationally Tractable

Chemical Compounds

Top Venues

J. Am. Medical Informatics Assoc.

Artif. Intell. Medicine

Publications

Taykhoom Dalal, Chirag J. Patel
PYPE: A pipeline for phenome-wide association and Mendelian randomization in investigator-driven biobank scale analysis. Patterns 5 (6) (2024)
Bryan Andrews, Chirayu Wongchokprasitti, Shyam Visweswaran, Chirag M. Lakhani, Chirag J. Patel, Gregory F. Cooper
A new method for estimating the probability of causal relationships from observational data: Application to the study of the short-term effects of air pollution on cardiovascular and respiratory disease. Artif. Intell. Medicine 139 (2023)
Kristin Passero, Shefali Setia Verma, Kimberly McAllister, Arjun Manrai, Chirag J. Patel, Molly A. Hall
What about the environment? Leveraging multi-omic datasets to characterize the environment's role in human health. PSB (2021)
Walter De Brouwer, Chirag J. Patel, Arjun K. Manrai, Isaac R. Rodriguez-Chavez, Nirav R. Shah
Empowering clinical research in a decentralized world. npj Digit. Medicine 4 (2021)
Inès Krissaane, Carlos De Niz, Alba Gutiérrez-Sacristán, Gabor Korodi, Nneka Ede, Ranjay Kumar, Jessica Lyons, Arjun K. Manrai, Chirag J. Patel, Isaac S. Kohane, Paul Avillach
Scalability and cost-effectiveness analysis of whole genome-wide association studies on Google Cloud Platform and Amazon Web Services. J. Am. Medical Informatics Assoc. 27 (9) (2020)
Alan Le Goallec, Braden T. Tierney, Jacob M. Luber, Evan M. Cofer, Aleksandar D. Kostic, Chirag J. Patel
A systematic machine learning and data type comparison yields metagenomic predictors of infant age, sex, breastfeeding, antibiotic usage, country of origin, and delivery type. PLoS Comput. Biol. 16 (5) (2020)
Jacob M. Luber, Braden T. Tierney, Evan M. Cofer, Chirag J. Patel, Aleksandar D. Kostic
Aether: leveraging linear programming for optimal cloud computing in genomics. Bioinform. 34 (9) (2018)
Alba Gutiérrez-Sacristán, Romain Guedj, Gabor Korodi, Jason Stedman, Laura Inés Furlong, Chirag J. Patel, Isaac S. Kohane, Paul Avillach
Rcupcake: an R package for querying and analyzing biomedical data through the BD2K PIC-SURE RESTful API. Bioinform. 34 (8) (2018)
Adam S. Brown, Chirag J. Patel
A review of validation strategies for computational drug repositioning. Briefings Bioinform. 19 (1) (2018)
Konrad J. Karczewski, Nicholas P. Tatonetti, Chirag J. Patel, Arjun K. Manrai, C. Titus Brown, John P. A. Ioannidis
Session Introduction. PSB (2017)
Adam S. Brown, Chirag J. Patel
MeSHDD: Literature-based drug-drug similarity for drug repositioning. J. Am. Medical Informatics Assoc. 24 (3) (2017)
Benjamin S. Glicksberg, Li Li, Marcus A. Badgeley, Khader Shameer, Roman Kosoy, Noam D. Beckmann, Nam Pho, Jörg Hakenberg, Meng Ma, Kristin L. Ayers, Gabriel E. Hoffman, Shuyu Dan Li, Eric E. Schadt, Chirag J. Patel, Rong Chen, Joel T. Dudley
Comparative analyses of population-scale phenomic data in electronic medical records reveal race-specific disease networks. Bioinform. 32 (12) (2016)
Adam S. Brown, Sek Won Kong, Isaac S. Kohane, Chirag J. Patel
ksRepo: a generalized platform for computational drug repositioning. BMC Bioinform. 17 (2016)
Arjun K. Manrai, Brice L. Wang, Chirag J. Patel, Isaac S. Kohane
Reproducible and Shareable Quantifications of Pathogenicity. PSB (2016)
Arjun K. Manrai, Chirag J. Patel, Nils Gehlenborg, Nicholas P. Tatonetti, John P. A. Ioannidis, Isaac S. Kohane
Session Introduction. PSB (2016)
Chirag J. Patel, Arjun K. Manrai
Development of Exposome Correlations Globes to Map Out Environment-Wide Associations. Pacific Symposium on Biocomputing (2015)
Adam S. Brown, Chirag J. Patel
aRrayLasso: a network-based approach to microarray interconversion. Bioinform. 31 (23) (2015)
Chirag J. Patel, Yotam Heineberg
Invited Speakers. AAAI Spring Symposium: Data Driven Wellness (2013)
Chirag J. Patel, Rong Chen, Atul J. Butte
Data-driven integration of epidemiological and toxicological data to select candidate interacting genes and environmental factors in association with disease. Bioinform. 28 (12) (2012)