Chase Cockrell

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 8

Top Topics

Simulation Model

Hypothesis Testing

Temporal Difference

Reinforcement Learning

Top Venues

PLoS Comput. Biol.

J. Comput. Biol.

Publications

Bryan Shin, Gary An, Chase Cockrell
Examining B-cell dynamics and responsiveness in different inflammatory milieus using an agent-based model. PLoS Comput. Biol. 20 (1) (2024)
Gary An, Chase Cockrell
Generating synthetic multi-dimensional molecular-mediator time series data for artificial intelligence-based disease trajectory forecasting and drug development digital twins: Considerations. CoRR (2023)
Chase Cockrell, Scott Christley, Gary An
Facilitating automated conversion of scientific knowledge into scientific simulation models with the Machine Assisted Generation, Calibration, and Comparison (MAGCC) Framework. CoRR (2022)
Chase Cockrell, Jonathan Ozik, Nick Collier, Gary An
Nested active learning for efficient model contextualization and parameterization: pathway to generating simulated populations using multi-scale computational models. Simul. 97 (4) (2021)
Brenden K. Petersen, Jiachen Yang, Will S. Grathwohl, Chase Cockrell, Claudio Santiago, Gary An, Daniel M. Faissol
Deep Reinforcement Learning and Simulation as a Path Toward Precision Medicine. J. Comput. Biol. 26 (6) (2019)
Chase Cockrell, Gary An
Examining the controllability of sepsis using genetic algorithms on an agent-based model of systemic inflammation. PLoS Comput. Biol. 14 (2) (2018)
Brenden K. Petersen, Jiachen Yang, Will S. Grathwohl, Chase Cockrell, Claudio Santiago, Gary An, Daniel M. Faissol
Precision medicine as a control problem: Using simulation and deep reinforcement learning to discover adaptive, personalized multi-cytokine therapy for sepsis. CoRR (2018)
Jonathan Ozik, Nicholson T. Collier, Justin M. Wozniak, Charles M. Macal, Chase Cockrell, Samuel H. Friedman, Ahmadreza Ghaffarizadeh, Randy W. Heiland, Gary An, Paul Macklin
High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow. BMC Bioinform. (18) (2018)
Scott Christley, Chase Cockrell, Gary An
Computational Studies of the Intestinal Host-Microbiota Interactome. Comput. 3 (1) (2015)
Chase Cockrell, Scott Christley, Gary An
Investigation of Inflammation and Tissue Patterning in the Gut Using a Spatially Explicit General-Purpose Model of Enteric Tissue (SEGMEnT). PLoS Comput. Biol. 10 (3) (2014)
Chase Cockrell, Scott Christley, Gary An, Eugene Chang, Marc Ward
Examining the dynamics of epithelial metaplasia and pouchitis in an ileal pouch with a spatially-explicit computational multi-scale gut model (MSGM). SpringSim (ADS) (2013)
Fang Liu, Ritu Mundhe, Masha Sosonkina, Chase Cockrell, Miles Aronnax, Pieter Maris, James P. Vary
A data management system for ab-initio nuclear physics applications. SpringSim (HPC) (2011)