Ahmadreza Ghaffarizadeh

Publication Activity (10 Years)

Years Active: 2011-2018
Publications (10 Years): 5

Top Topics

Gene Regulatory

Coalition Formation

Linkage Disequilibrium

Top Venues

Publications

Jonathan Ozik, Nicholson T. Collier, Justin M. Wozniak, Charles M. Macal, Chase Cockrell, Samuel H. Friedman, Ahmadreza Ghaffarizadeh, Randy W. Heiland, Gary An, Paul Macklin
High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow. BMC Bioinform. (18) (2018)
Ahmadreza Ghaffarizadeh, Randy W. Heiland, Samuel H. Friedman, Shannon M. Mumenthaler, Paul Macklin
PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems. PLoS Comput. Biol. 14 (2) (2018)
Ahmadreza Ghaffarizadeh, Gregory J. Podgorski, Nicholas S. Flann
Applying attractor dynamics to infer gene regulatory interactions involved in cellular differentiation. Biosyst. 155 (2017)
Edwin F. Juarez, Roy Lau, Samuel H. Friedman, Ahmadreza Ghaffarizadeh, Edmond A. Jonckheere, David B. Agus, Shannon M. Mumenthaler, Paul Macklin
Quantifying differences in cell line population dynamics using CellPD. BMC Syst. Biol. 10 (2016)
Ahmadreza Ghaffarizadeh, Samuel H. Friedman, Paul Macklin
BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations. Bioinform. 32 (8) (2016)
Ahmadreza Ghaffarizadeh, Gregory J. Podgorski, Nicholas S. Flann
Modeling and Visualizing Cell Type Switching. Comput. Math. Methods Medicine 2014 (2014)
Ahmadreza Ghaffarizadeh, Nicholas S. Flann, Gregory J. Podgorski
Multistable switches and their role in cellular differentiation networks. BMC Bioinform. 15 (S-7) (2014)
Ahmadreza Ghaffarizadeh, Mehdi Eftekhari, Ali K. Esmailizadeh, Nicholas S. Flann
Quantitative Trait Loci Mapping Problem: An Extinction-Based Multi-Objective Evolutionary Algorithm Approach. Algorithms 6 (3) (2013)
Ahmadreza Ghaffarizadeh, Vicki H. Allan
History Based Coalition Formation in Hedonic Context Using Trust. CoRR (2013)
Ahmadreza Ghaffarizadeh, Kamilia Ahmadi, Nicholas S. Flann
Sorting unsigned permutations by reversals using multi-objective evolutionary algorithms with variable size individuals. IEEE Congress on Evolutionary Computation (2011)