Artem Lysenko

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 7

Top Topics

Colorectal Cancer

Integrating Multiple

Top Venues

Briefings Bioinform.

Publications

Shangru Jia, Artem Lysenko, Keith A. Boroevich, Alok Sharma, Tatsuhiko Tsunoda
scDeepInsight: a supervised cell-type identification method for scRNA-seq data with deep learning. Briefings Bioinform. 24 (5) (2023)
Alok Sharma, Artem Lysenko, Keith A. Boroevich, Edwin Vans, Tatsuhiko Tsunoda
DeepFeature: feature selection in nonimage data using convolutional neural network. Briefings Bioinform. 22 (6) (2021)
Mansoor Saqi, Artem Lysenko, Yike Guo, Tatsuhiko Tsunoda, Charles Auffray
Navigating the disease landscape: knowledge representations for contextualizing molecular signatures. Briefings Bioinform. 20 (2) (2019)
Artem Lysenko, Keith A. Boroevich, Tatsuhiko Tsunoda
Arete - candidate gene prioritization using biological network topology with additional evidence types. BioData Min. 10 (1) (2017)
Irina Balaur, Mansoor Saqi, Ana Barat, Artem Lysenko, Alexander Mazein, Christopher J. Rawlings, Heather J. Ruskin, Charles Auffray
EpiGeNet: A Graph Database of Interdependencies Between Genetic and Epigenetic Events in Colorectal Cancer. J. Comput. Biol. 24 (10) (2017)
Irina Balaur, Alexander Mazein, Mansoor Saqi, Artem Lysenko, Christopher J. Rawlings
Recon2Neo4j: applying graph database technologies for managing comprehensive genome-scale networks. Bioinform. 33 (7) (2017)
Artem Lysenko, Irina A. Roznovat, Mansoor Saqi, Alexander Mazein, Christopher J. Rawlings, Charles Auffray
Representing and querying disease networks using graph databases. BioData Min. 9 (2016)
Artem Lysenko, Jacek Grzebyta, Matthew Morritt Hindle, Christopher J. Rawlings, Andrea Splendiani
A Framework for Mining Life Sciences Data on the Semantic Web in an Interactive, Graph-Based Environment. CIBB (2013)
Valeria Bo, Artem Lysenko, Mansoor Saqi, Dimah Z. Habash, Allan Tucker
Integrating Multiple Studies of Wheat Microarray Data to Identify Treatment-Specific Regulatory Networks. IDA (2013)
Laura Bennett, Artem Lysenko, Lazaros G. Papageorgiou, Martin Urban, Kim E. Hammond-Kosack, Christopher J. Rawlings, Mansoor Saqi, Sophia Tsoka
Detection of Multi-clustered Genes and Community Structure for the Plant Pathogenic Fungus Fusarium graminearum. CMSB (2012)
Michael Defoin-Platel, Matthew Morritt Hindle, Artem Lysenko, Stephen J. Powers, Dimah Z. Habash, Christopher J. Rawlings, Mansoor Saqi
AIGO: Towards a unified framework for the Analysis and the Inter-comparison of GO functional annotations. BMC Bioinform. 12 (2011)
Artem Lysenko, Michael Defoin-Platel, Keywan Hassani-Pak, Jan Taubert, Charlie Hodgman, Christopher J. Rawlings, Mansoor Saqi
Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis. BMC Bioinform. 12 (2011)
Catherine Canevet, Artem Lysenko, Andrea Splendiani, Matthew R. Pocock, Christopher J. Rawlings
Analysis and visualisation of RDF resources in Ondex CoRR (2010)
Catherine Canevet, Artem Lysenko, Andrea Splendiani, Matthew R. Pocock, Christopher J. Rawlings
Analysis and Visualisation of RDF Resources in Ondex. SWAT4LS (2010)
Artem Lysenko, Matthew Morritt Hindle, Jan Taubert, Mansoor Saqi, Christopher J. Rawlings
databases. Briefings Bioinform. 11 (2) (2010)
Jan Taubert, Matthew Hindle, Artem Lysenko, Jochen Weile, Jacob Köhler, Christopher J. Rawlings
Linking Life Sciences Data Using Graph-Based Mapping. DILS (2009)
Artem Lysenko, Matthew Morritt Hindle, Jan Taubert, Mansoor Saqi, Christopher J. Rawlings
databases. Briefings Bioinform. 10 (6) (2009)
Robert Pesch, Artem Lysenko, Matthew Hindle, Keywan Hassani-Pak, Ralf Thiele, Christopher J. Rawlings, Jacob Köhler, Jan Taubert
Graph-based sequence annotation using a data integration approach. J. Integr. Bioinform. 5 (2) (2008)