Jacob Köhler

Publication Activity (10 Years)

Years Active: 2000-2009
Publications (10 Years): 0

Bielefeld University, Germany (PHD)

Education History

Bielefeld University, Germany

PHD

Publications

Jan Taubert, Matthew Hindle, Artem Lysenko, Jochen Weile, Jacob Köhler, Christopher J. Rawlings
Linking Life Sciences Data Using Graph-Based Mapping. DILS (2009)
Rainer Winnenburg, Martin Urban, Andrew M. Beacham, Thomas K. Baldwin, Sabrina Holland, Magdalen Lindeberg, Hilde Hansen, Christopher J. Rawlings, Kim E. Hammond-Kosack, Jacob Köhler
PHI-base update: additions to the pathogen-host interaction database. Nucleic Acids Res. 36 (Database-Issue) (2008)
Robert Pesch, Artem Lysenko, Matthew Hindle, Keywan Hassani-Pak, Ralf Thiele, Christopher J. Rawlings, Jacob Köhler, Jan Taubert
Graph-based sequence annotation using a data integration approach. J. Integr. Bioinform. 5 (2) (2008)
Jan Taubert, Klaus Peter Sieren, Matthew Hindle, Berend Hoekman, Rainer Winnenburg, Stephan Philippi, Christopher J. Rawlings, Jacob Köhler
The OXL format for the exchange of integrated datasets. J. Integr. Bioinform. 4 (3) (2007)
Jacob Köhler, Jan Baumbach, Jan Taubert, Michael Specht, Andre Skusa, Alexander Rüegg, Christopher J. Rawlings, Paul Verrier, Stephan Philippi
Graph-based analysis and visualization of experimental results with ONDEX. Bioinform. 22 (11) (2006)
Stephan Philippi, Jacob Köhler
Automated Structure Extraction and XML Conversion of Life Science Database Flat Files. IEEE Trans. Inf. Technol. Biomed. 10 (4) (2006)
Jacob Köhler, Katherine Munn, Alexander Rüegg, Andre Skusa, Barry Smith
Quality control for terms and definitions in ontologies and taxonomies. BMC Bioinform. 7 (2006)
Rainer Winnenburg, Thomas K. Baldwin, Martin Urban, Christopher J. Rawlings, Jacob Köhler, Kim E. Hammond-Kosack
PHI-base: a new database for pathogen host interactions. Nucleic Acids Res. 34 (Database-Issue) (2006)
Jacob Köhler, Stephan Philippi, Michael Specht, Alexander Rüegg
Ontology based text indexing and querying for the semantic web. Knowl. Based Syst. 19 (8) (2006)
Andre Skusa, Alexander Rüegg, Jacob Köhler
Extraction of biological interaction networks from scientific literature. Briefings Bioinform. 6 (3) (2005)
Stephan Philippi, Jacob Köhler
Using XML Technology for the Ontology-Based Semantic Integration of Life Science Databases. IEEE Trans. Inf. Technol. Biomed. 8 (2) (2004)
Barry Smith, Jacob Köhler, Anand Kumar
On the Application of Formal Principles to Life Science Data: a Case Study in the Gene Ontology. DILS (2004)
Jacob Köhler, Christopher J. Rawlings, Paul Verrier, Rowan A. C. Mitchell, Andre Skusa, Alexander Rüegg, Stephan Philippi
Linking experimental results, biological networks and sequence analysis methods using Ontologies and Generalized Data Structures. Silico Biol. 5 (1) (2004)
Jacob Köhler, Stephan Philippi, Matthias Lange
SEMEDA: ontology based semantic integration of biological databases. Bioinform. 19 (18) (2003)
Jacob Köhler, Steffen Schulze-Kremer
The Semantic Metadatabase (SEMEDA): Ontology Based Integration of Federated Molecular Biological Data Sources. Silico Biol. 2 (3) (2002)
Ming Chen, Andreas Freier, Jacob Köhler, Alexander Rüegg
The biology Petri net markup language. Promise (2002)
Jacob Köhler, Steffen Schulze-Kremer
The Semantic Metadatabase (SEMEDA): Ontology Based Integration of Federated Molecular Biological Data Sources. German Conference on Bioinformatics (2001)
Jacob Köhler, Matthias Lange, Ralf Hofestädt, Steffen Schulze-Kremer
Logical and Semantic Database Integration. BIBE (2000)

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Publication Activity (10 Years)

Jacob Köhler