Arnau Montagud

Publication Activity (10 Years)

Years Active: 2010-2023
Publications (10 Years): 8

Top Topics

Simulation Model

Living Organisms

Metabolic Engineering

Top Venues

J. Comput. Biol.

Publications

Marc Clascà, Marta Garcia-Gasulla, Arnau Montagud, José Carbonell-Caballero, Alfonso Valencia
Lessons learned from a performance analysis and optimization of a multiscale cellular simulation. CoRR (2023)
Marc Clascà, Marta Garcia-Gasulla, Arnau Montagud, José Carbonell-Caballero, Alfonso Valencia
Lessons Learned from a Performance Analysis and Optimization of a Multiscale Cellular Simulation. PASC (2023)
Charilaos Akasiadis, Miguel Ponce de Leon, Arnau Montagud, Evangelos Michelioudakis, Alexia Atsidakou, Elias Alevizos, Alexander Artikis, Alfonso Valencia, Georgios Paliouras
Parallel model exploration for tumor treatment simulations. Comput. Intell. 38 (4) (2022)
Charilaos Akasiadis, Miguel Ponce de Leon, Arnau Montagud, Evangelos Michelioudakis, Alexia Atsidakou, Elias Alevizos, Alexander Artikis, Alfonso Valencia, Georgios Paliouras
Parallel Model Exploration for Tumor Treatment Simulations. CoRR (2021)
Gaurav Saxena, Miguel Ponce de Leon, Arnau Montagud, David Vicente Dorca, Alfonso Valencia
BioFVM-X: An MPI+OpenMP 3-D Simulator for Biological Systems. CMSB (2021)
Nikos Giatrakos, David Arnu, Theodoros Bitsakis, Antonios Deligiannakis, Minos N. Garofalakis, Ralf Klinkenberg, Aris Konidaris, Antonis Kontaxakis, Yannis Kotidis, Vasilis Samoladas, Alkis Simitsis, George Stamatakis, Fabian Temme, Mate Torok, Edwin Yaqub, Arnau Montagud, Miguel Ponce de Leon, Holger Arndt, Stefan Burkard
INforE: Interactive Cross-platform Analytics for Everyone. CIKM (2020)
Arnau Montagud, Pauline Traynard, Loredana Martignetti, Eric Bonnet, Emmanuel Barillot, Andrei Yu. Zinovyev, Laurence Calzone
Conceptual and computational framework for logical modelling of biological networks deregulated in diseases. Briefings Bioinform. 20 (4) (2019)
Gaëlle Letort, Arnau Montagud, Gautier Stoll, Randy W. Heiland, Emmanuel Barillot, Paul Macklin, Andrei Yu. Zinovyev, Laurence Calzone
PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling. Bioinform. 35 (7) (2019)
Daniel Gamermann, Arnau Montagud, J. Alberto Conejero, Javier F. Urchueguía, Pedro Fernández de Córdoba
New Approach for Phylogenetic Tree Recovery Based on Genome-Scale Metabolic Networks. J. Comput. Biol. 21 (7) (2014)
R. Reyes, Daniel Gamermann, Arnau Montagud, David Fuente, J. Triana, Javier F. Urchueguía Schölzel, Pedro Fernández de Córdoba
Automation on the Generation of Genome-Scale Metabolic Models. J. Comput. Biol. 19 (12) (2012)
Arnau Montagud, Emilio Navarro, Pedro Fernández de Córdoba, Javier F. Urchueguía, Kiran Raosaheb Patil
Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium. BMC Syst. Biol. 4 (2010)