Anil G. Jegga

Publication Activity (10 Years)

Years Active: 2005-2022
Publications (10 Years): 6

Top Topics

Graph Clustering

Top Venues

BMC Syst. Biol.

BMC Medical Informatics Decis. Mak.

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Jaswanth K. Yella, Anil G. Jegga
MGATRx: Discovering Drug Repositioning Candidates Using Multi-View Graph Attention. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (5) (2022)
Jaswanth K. Yella, Sudhir Ghandikota, Anil G. Jegga
GraMDTA: Multimodal Graph Neural Networks for Predicting Drug-Target Associations. BIBM (2022)
Sudhir Ghandikota, Jaswanth K. Yella, Anil G. Jegga
Multimodal feature learning framework for disease biomarker discovery. BIBM (2022)
Sudhir Ghandikota, Mihika Sharma, Anil G. Jegga
Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19. Patterns 2 (5) (2021)
Sudhir Ghandikota, Anil G. Jegga
A multi-context feature learning approach to identify disease-specific gene neighborhoods. BCB (2020)
Yizong Cheng, Jaswanth K. Yella, Anil G. Jegga
Triangle-Based Tripartite Graph Clustering. BIBM (2020)
Chao Wu, Eric E. Bardes, Anil G. Jegga, Bruce J. Aronow
ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Qi Li, Louise Deléger, Todd Lingren, Haijun Zhai, Megan Kaiser, Laura Stoutenborough, Anil G. Jegga, Kevin Bretonnel Cohen, Imre Solti
Mining FDA drug labels for medical conditions. BMC Medical Informatics Decis. Mak. 13 (2013)
Chao Wu, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga
Computational drug repositioning through heterogeneous network clustering. BMC Syst. Biol. 7 (S-5) (2013)
Louise Deléger, Katalin Molnár, Guergana Savova, Fei Xia, Todd Lingren, Qi Li, Keith Marsolo, Anil G. Jegga, Megan Kaiser, Laura Stoutenborough, Imre Solti
Large-scale evaluation of automated clinical note de-identification and its impact on information extraction. J. Am. Medical Informatics Assoc. 20 (1) (2013)
Kazuhiko Bessho, Kumar Shanmukhappa, Rachel Sheridan, Pranavkumar Shivakumar, Reena Mourya, Stephanie Walters, Vivek Kaimal, Eric Dilbone, Anil G. Jegga, Jorge A. Bezerra
Integrative genomics identifies candidate microRNAs for pathogenesis of experimental biliary atresia. BMC Syst. Biol. 7 (2013)
Chao Wu, Arjun Bakshi, Bruce J. Aronow, Anil G. Jegga, Raj Bhatnagar
A Biclustering Algorithm to Discover Functional Modules from ENCODE ChIP-Seq Data. ICDM Workshops (2013)
Cheng Zhu, Akash Kushwaha, Kenneth Berman, Anil G. Jegga
A vertex similarity-based framework to discover and rank orphan disease-related genes. BMC Syst. Biol. 6 (S-3) (2012)
Lun Yang, Kejian Wang, Jian Chen, Anil G. Jegga, Heng Luo, Leming Shi, Chunling Wan, Xizhi Guo, Shengying Qin, Guang He, Guoyin Feng, Lin He
Exploring Off-Targets and Off-Systems for Adverse Drug Reactions via Chemical-Protein Interactome - Clozapine-Induced Agranulocytosis as a Case Study. PLoS Comput. Biol. 7 (3) (2011)
Divya Sardana, Cheng Zhu, Minlu Zhang, Ranga Chandra Gudivada, Lun Yang, Anil G. Jegga
Drug repositioning for orphan diseases. Briefings Bioinform. 12 (4) (2011)
Vivek Kaimal, Eric E. Bardes, Scott C. Tabar, Anil G. Jegga, Bruce J. Aronow
ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Divya Sardana, Suresh Vasa, Nishanth Vepachedu, Jing Chen, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga
PhenoHM: human-mouse comparative phenome-genome server. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Faris Alqadah, Raj Bhatnagar, Anil G. Jegga
A novel framework for detecting maximally banded matrices in binary data. Stat. Anal. Data Min. 3 (6) (2010)
Faris Alqadah, Raj Bhatnagar, Anil G. Jegga
Mining Maximally Banded Matrices in Binary Data. SDM (2010)
Sivakumar Gowrisankar, Anil G. Jegga
Regression based predictor for p53 transactivation. BMC Bioinform. 10 (2009)
Jing Chen, Bruce J. Aronow, Anil G. Jegga
Correction: Disease candidate gene identification and prioritization using protein interaction networks. BMC Bioinform. 10 (2009)
Xiaoyan A. Qu, Ranga Chandra Gudivada, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow
Inferring novel disease indications for known drugs by semantically linking drug action and disease mechanism relationships. BMC Bioinform. 10 (S-5) (2009)
Jing Chen, Bruce J. Aronow, Anil G. Jegga
Disease candidate gene identification and prioritization using protein interaction networks. BMC Bioinform. 10 (2009)
Jing Chen, Eric E. Bardes, Bruce J. Aronow, Anil G. Jegga
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Ranga Chandra Gudivada, Xiaoyan A. Qu, Jing Chen, Anil G. Jegga, Eric K. Neumann, Bruce J. Aronow
Identifying disease-causal genes using Semantic Web-based representation of integrated genomic and phenomic knowledge. J. Biomed. Informatics 41 (5) (2008)
Amit U. Sinha, Mukta Phatak, Raj Bhatnagar, Anil G. Jegga
Identifying Functional Binding Motifs of Tumor Protein p53 Using Support Vector Machines. ICMLA (2007)
Jing Chen, Huan Xu, Bruce J. Aronow, Anil G. Jegga
Improved human disease candidate gene prioritization using mouse phenotype. BMC Bioinform. 8 (2007)
Anil G. Jegga, Sivakumar Gowrisankar, Jing Chen, Bruce J. Aronow
PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact disease. Nucleic Acids Res. 35 (Database-Issue) (2007)
Anil G. Jegga, Jing Chen, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Ranga Chandra Gudivada, Sue Kong, Vivek Kaimal, Bruce J. Aronow
GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologs. Nucleic Acids Res. 35 (Database-Issue) (2007)
Anil G. Jegga, Ashima Gupta, Sivakumar Gowrisankar, Mrunal A. Deshmukh, Steven Connolly, Kevin Finley, Bruce J. Aronow
-element clusters in ortholog conserved regions of coordinately expressed genes. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)