GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologs.
Anil G. JeggaJing ChenSivakumar GowrisankarMrunal A. DeshmukhRanga Chandra GudivadaSue KongVivek KaimalBruce J. AronowPublished in: Nucleic Acids Res. (2007)
Keyphrases
- binding sites
- sequenced genomes
- transcription factor binding sites
- coding regions
- gene expression
- dna sequences
- transcription factors
- sequence data
- sequence alignment
- genomic sequences
- motif discovery
- dna binding
- regulatory elements
- protein interaction
- biological sequences
- statistical significance
- protein coding regions
- gene clusters
- gene sets
- gene expression data
- genome sequences
- gene regulation
- clustering algorithm
- genome scale
- regulatory networks
- single nucleotide polymorphisms
- cluster analysis
- microarray technology
- gene expression patterns
- biological processes
- microarray