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GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs.
Manuel Tognon
Vincenzo Bonnici
Erik Garrison
Rosalba Giugno
Luca Pinello
Published in:
PLoS Comput. Biol. (2021)
Keyphrases
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dna sequences
human genome
graph representation
image processing
graph theory
weighted graph
series parallel
graph matching
graph theoretic
graph partitioning
undirected graph
structural motifs
haplotype inference
complex structures
variable length
structured light
directed graph
optimal solution