PEtab - Interoperable specification of parameter estimation problems in systems biology.
Leonard SchmiesterYannik SchälteFrank T. BergmannTacio CambaErika DudkinJanine EgertFabian FröhlichLara FuhrmannAdrian L. HauberSvenja KemmerPolina A. LakrisenkoCarolin LoosSimon MerktWolfgang MüllerDilan PathiranaElba Raimúndez-ÁlvarezLukas RefischMarcus RosenblattPaul L. StaporPhilipp StädterDantong WangFranz-Georg WielandJulio R. BangaJens TimmerAlejandro F. VillaverdeSven SahleClemens KreutzJan HasenauerDaniel WeindlPublished in: PLoS Comput. Biol. (2021)
Keyphrases
- systems biology
- estimation problems
- high throughput
- parameter estimation
- biological systems
- biological data
- high dimensional
- biological networks
- molecular biology
- protein protein interactions
- gene regulatory networks
- particle filter
- computational biology
- covariance matrices
- state estimation
- neural network
- microarray
- object tracking
- dynamic bayesian networks
- life sciences
- knowledge discovery