GPU-Based Point Cloud Superpositioning for Structural Comparisons of Protein Binding Sites.
Matthias LeinweberThomas FoberBernd FreislebenPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2018)
Keyphrases
- point cloud
- binding sites
- dna binding
- protein protein
- sequence alignment
- regulatory elements
- transcription factor binding sites
- drosophila melanogaster
- protein interaction
- gene expression
- dna sequences
- transcription factors
- sequence data
- structure from motion
- protein families
- motif discovery
- biological sequences
- point sets
- influenza virus
- statistical significance
- high throughput
- laser scanner
- protein protein interactions
- protein function
- genome wide
- protein structure
- microarray
- genome sequences
- computational methods
- protein sequences
- regulatory networks
- interaction networks
- sequence similarity
- coding regions
- cis regulatory
- genomic sequences
- statistical tests
- computational biology
- rna sequences
- implicit surfaces