Thomas Fober

Publication Activity (10 Years)

Years Active: 2008-2019
Publications (10 Years): 7

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

IFSA/NAFIPS

CoRR

GeoInformatica

University of Marburg (PHD)

Education History

University of Marburg

PHD

Publications

Christian Beilschmidt, Michael Mattig, Thomas Fober, Bernhard Seeger
An Efficient Method for Exploratory Data Visualization of Big Spatial Data on Commodity Hardware. GI-Jahrestagung (2019)
Christian Beilschmidt, Michael Mattig, Thomas Fober, Bernhard Seeger
An efficient aggregation and overlap removal algorithm for circle maps. GeoInformatica 23 (3) (2019)
Matthias Leinweber, Thomas Fober, Bernd Freisleben
GPU-Based Point Cloud Superpositioning for Structural Comparisons of Protein Binding Sites. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (3) (2018)
Michael Mattig, Thomas Fober, Christian Beilschmidt, Bernhard Seeger
Kernel-Based Cardinality Estimation on Metric Data. EDBT (2018)
Christian Beilschmidt, Thomas Fober, Michael Mattig, Bernhard Seeger
Quality Measures for Visual Point Clustering in Geospatial Mapping. W2GIS (2017)
Christian Beilschmidt, Thomas Fober, Michael Mattig, Bernhard Seeger
A Linear-Time Algorithm for the Aggregation and Visualization of Big Spatial Point Data. SIGSPATIAL/GIS (2017)
Matthias Leinweber, Thomas Fober, Marc Strickert, Lars Baumgärtner, Gerhard Klebe, Bernd Freisleben, Eyke Hüllermeier
CavSimBase: A Database for Large Scale Comparison of Protein Binding Sites. IEEE Trans. Knowl. Data Eng. 28 (6) (2016)
Michiel Stock, Thomas Fober, Eyke Hüllermeier, Serghei Glinca, Gerhard Klebe, Tapio Pahikkala, Antti Airola, Bernard De Baets, Willem Waegeman
Identification of Functionally Related Enzymes by Learning-to-Rank Methods. IEEE ACM Trans. Comput. Biol. Bioinform. 11 (6) (2014)
Timo Krotzky, Thomas Rickmeyer, Thomas Fober, Gerhard Klebe
Extraction of Protein Binding Pockets in Close Neighborhood of Bound Ligands Makes Comparisons Simple Due to Inherent Shape Similarity. J. Chem. Inf. Model. 54 (11) (2014)
Timo Krotzky, Thomas Fober, Eyke Hüllermeier, Gerhard Klebe
Extended Graph-Based Models for Enhanced Similarity Search in Cavbase. IEEE ACM Trans. Comput. Biol. Bioinform. 11 (5) (2014)
Michiel Stock, Thomas Fober, Eyke Hüllermeier, Serghei Glinca, Gerhard Klebe, Tapio Pahikkala, Antti Airola, Bernard De Baets, Willem Waegeman
Identification of functionally related enzymes by learning-to-rank methods. CoRR (2014)
Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier
Graph-based methods for protein structure comparison. WIREs Data Mining Knowl. Discov. 3 (5) (2013)
Maryam Nasiri, Thomas Fober, Robin Senge, Eyke Hüllermeier
Fuzzy pattern trees as an alternative to rule-based fuzzy systems: Knowledge-driven, data-driven and hybrid modeling of color yield in polyester dyeing. IFSA/NAFIPS (2013)
Timo Krotzky, Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier
Extended graph-based models for enhanced similarity retrieval in Cavbase. J. Cheminformatics 5 (S-1) (2013)
Robin Senge, Thomas Fober, Maryam Nasiri, Eyke Hüllermeier
Fuzzy Pattern Trees: Ein alternativer Ansatz zur Fuzzy-Modellierung. Autom. 60 (10) (2012)
Matthias Leinweber, Lars Baumgärtner, Marco Mernberger, Thomas Fober, Eyke Hüllermeier, Gerhard Klebe, Bernd Freisleben
GPU-based Cloud computing for comparing the structure of protein binding sites. DEST (2012)
Thomas Fober, Serghei Glinca, Gerhard Klebe, Eyke Hüllermeier
Superposition and Alignment of Labeled Point Clouds. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (6) (2011)
Thomas Fober, Eyke Hüllermeier
Similarity measures for protein structures based on fuzzy histogram comparison. FUZZ-IEEE (2010)
Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier
Efficient Similarity Retrieval of Protein Binding Sites based on Histogram Comparison. GCB (2010)
Patrick Pfeffer, Thomas Fober, Eyke Hüllermeier, Gerhard Klebe
GARLig: A Fully Automated Tool for Subset Selection of Large Fragment Spaces via a Self-Adaptive Genetic Algorithm. J. Chem. Inf. Model. 50 (9) (2010)
Thomas Fober, Eyke Hüllermeier
Fuzzy Modeling of Labeled Point Cloud Superposition for the Comparison of Protein Binding Sites. IFSA/EUSFLAT Conf. (2009)
Yu Yi, Thomas Fober, Eyke Hüllermeier
Fuzzy Operator Trees for Modeling Rating Functions. Int. J. Comput. Intell. Appl. 8 (4) (2009)
Thomas Fober, Gerhard Klebe, Eyke Hüllermeier
Efficient Construction of Multiple Geometrical Alignments for the Comparison of Protein Binding Sites. ISDA (2009)
Thomas Fober, Marco Mernberger, Ralph Moritz, Eyke Hüllermeier
Graph-Kernels for the Comparative Analysis of Protein Active Sites. GCB (2009)
Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier
Evolutionary construction of multiple graph alignments for the structural analysis of biomolecules. Bioinform. 25 (16) (2009)
Thomas Fober, Marco Mernberger, Vitalik Melnikov, Ralph Moritz, Eyke Hüllermeier
Extension and Empirical Comparison of Graph-Kernels for the Analysis of Protein Active Sites. LWA (2009)
Imen Boukhris, Zied Elouedi, Thomas Fober, Marco Mernberger, Eyke Hüllermeier
Similarity Analysis of Protein Binding Sites: A Generalization of the Maximum Common Subgraph Measure Based on Quasi-Clique Detection. ISDA (2009)
Thomas Fober, Eyke Hüllermeier, Marco Mernberger
Evolutionary Construction of Multiple Graph Alignments for Mining Structured Biomolecular Data. LWA (2008)
Thomas Fober, Eyke Hüllermeier, Marco Mernberger
Evolutionary Construction of Multiple Graph Alignments for the Structural Analysis of Biomolecules. German Conference on Bioinformatics (2008)

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Publication Activity (10 Years)

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Thomas Fober