Yanzhi Guo

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 15

Top Topics

Protein Interaction

Drug Resistance

Top Venues

J. Chem. Inf. Model.

J. Comput. Aided Mol. Des.

Comput. Biol. Medicine

Briefings Bioinform.

Publications

Jianfang Chen, Yuanpeng Song, Luhan Ma, Yizhou Jin, Jin Yu, Yanzhi Guo, Yan Huang, Xuemei Pu
Computational insights into diverse binding modes of the allosteric modulator and their regulation on dopamine D1 receptor. Comput. Biol. Medicine 173 (2024)
Jian He, Menglong Li, Jiangguo Qiu, Xuemei Pu, Yanzhi Guo
HOPEXGB: A Consensual Model for Predicting miRNA/lncRNA-Disease Associations Using a Heterogeneous Disease-miRNA-lncRNA Information Network. J. Chem. Inf. Model. 64 (7) (2024)
Jiali Guo, Ming Sun, Xueyan Zhao, Chaojie Shi, Haoming Su, Yanzhi Guo, Xuemei Pu
General Graph Neural Network-Based Model To Accurately Predict Cocrystal Density and Insight from Data Quality and Feature Representation. J. Chem. Inf. Model. 63 (4) (2023)
Yanling Wu, Kun Li, Menglong Li, Xuemei Pu, Yanzhi Guo
Attention Mechanism-Based Graph Neural Network Model for Effective Activity Prediction of SARS-CoV-2 Main Protease Inhibitors: Application to Drug Repurposing as Potential COVID-19 Therapy. J. Chem. Inf. Model. 63 (22) (2023)
Shiqi Li, Xin Chen, Jianfang Chen, Binjian Wu, Jing Liu, Yanzhi Guo, Menglong Li, Xuemei Pu
Multi-omics integration analysis of GPCRs in pan-cancer to uncover inter-omics relationships and potential driver genes. Comput. Biol. Medicine 161 (2023)
Chuan Li, Jiangting Liu, Jianfang Chen, Yuan Yuan, Jin Yu, Qiaolin Gou, Yanzhi Guo, Xuemei Pu
An Interpretable Convolutional Neural Network Framework for Analyzing Molecular Dynamics Trajectories: a Case Study on Functional States for G-Protein-Coupled Receptors. J. Chem. Inf. Model. 62 (6) (2022)
Fuhui Zhang, Xin Chen, Jianfang Chen, Yanjiani Xu, Shiqi Li, Yanzhi Guo, Xuemei Pu
Probing Allosteric Regulation Mechanism of W7.35 on Agonist-Induced Activity for μOR by Mutation Simulation. J. Chem. Inf. Model. 62 (21) (2022)
Xin Chen, Yuan Yuan, Yichi Chen, Jin Yu, Jingzhou Wang, Jianfang Chen, Yanzhi Guo, Xuemei Pu
Biased Activation Mechanism Induced by GPCR Heterodimerization: Observations from μOR/δOR Dimers. J. Chem. Inf. Model. 62 (22) (2022)
Chuan Li, Chenghui Wang, Ming Sun, Yan Zeng, Yuan Yuan, Qiaolin Gou, Guangchuan Wang, Yanzhi Guo, Xuemei Pu
Correlated RNN Framework to Quickly Generate Molecules with Desired Properties for Energetic Materials in the Low Data Regime. J. Chem. Inf. Model. 62 (20) (2022)
Liu Qin, Yanhong Liu, Menglong Li, Xuemei Pu, Yanzhi Guo
The landscape of miRNA-related ceRNA networks for marking different renal cell carcinoma subtypes. Briefings Bioinform. 21 (1) (2020)
Fuhui Zhang, Yuan Yuan, Minghui Xiang, Yanzhi Guo, Menglong Li, Yijing Liu, Xuemei Pu
Molecular Mechanism Regarding Allosteric Modulation of Ligand Binding and the Impact of Mutations on Dimerization for CCR5 Homodimer. J. Chem. Inf. Model. 59 (5) (2019)
Wen Hu, Liu Qin, Menglong Li, Xuemei Pu, Yanzhi Guo
Individually double minimum-distance definition of protein-RNA binding residues and application to structure-based prediction. J. Comput. Aided Mol. Des. 32 (12) (2018)
Yu Wang, Yanzhi Guo, Xuemei Pu, Menglong Li
Effective prediction of bacterial type IV secreted effectors by combined features of both C-termini and N-termini. J. Comput. Aided Mol. Des. 31 (11) (2017)
Yu Wang, Yanzhi Guo, Qifan Kuang, Xuemei Pu, Yue Ji, Zhihang Zhang, Menglong Li
A comparative study of family-specific protein-ligand complex affinity prediction based on random forest approach. J. Comput. Aided Mol. Des. 29 (4) (2015)
Yuanyuan Fu, Yanzhi Guo, Yuelong Wang, Jiesi Luo, Xuemei Pu, Menglong Li, Zhihang Zhang
Exploring the relationship between hub proteins and drug targets based on GO and intrinsic disorder. Comput. Biol. Chem. 56 (2015)
Jiesi Luo, Yanzhi Guo, Yun Zhong, Duo Ma, Wenling Li, Menglong Li
A functional feature analysis on diverse protein-protein interactions: application for the prediction of binding affinity. J. Comput. Aided Mol. Des. 28 (6) (2014)
Lezheng Yu, Jiesi Luo, Yanzhi Guo, Yizhou Li, Xuemei Pu, Menglong Li
In silico identification of Gram-negative bacterial secreted proteins from primary sequence. Comput. Biol. Medicine 43 (9) (2013)
Wenli Qin, Yizhou Li, Juan Li, Lezheng Yu, Di Wu, Runyu Jing, Xuemei Pu, Yanzhi Guo, Menglong Li
Predicting deleterious non-synonymous single nucleotide polymorphisms in signal peptides based on hybrid sequence attributes. Comput. Biol. Chem. 36 (2012)
Yongqing Zhang, Danling Zhang, Gang Mi, Daichuan Ma, Gongbing Li, Yanzhi Guo, Menglong Li, Min Zhu
Using ensemble methods to deal with imbalanced data in predicting protein-protein interactions. Comput. Biol. Chem. 36 (2012)
Xia Wang, Gang Mi, Cuicui Wang, Yongqing Zhang, Juan Li, Yanzhi Guo, Xuemei Pu, Menglong Li
Prediction of flavin mono-nucleotide binding sites using modified PSSM profile and ensemble support vector machine. Comput. Biol. Medicine 42 (11) (2012)
Daichuan Ma, Jiamin Xiao, Yizhou Li, Yuanbo Diao, Yanzhi Guo, Menglong Li
Feature importance analysis in guide strand identification of microRNAs. Comput. Biol. Chem. 35 (3) (2011)