Xuezhong Zhou

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 40

Top Topics

Traditional Chinese Medicine

Tensor Decomposition

Gene Prediction

Top Venues

Briefings Bioinform.

Publications

Zixin Shu, Rui Hua, Dengying Yan, Chenxia Lu, Ning Xu, Jun Li, Hui Zhu, Jia Zhang, Dan Zhao, Chenyang Hui, Junqiu Ye, Chu Liao, Qi Hao, Wen Ye, Cheng Luo, Xinyan Wang, Chuang Cheng, Xiaodong Li, Baoyan Liu, Xiaji Zhou, Runshun Zhang, Min Xu, Xuezhong Zhou
ISPO: An Integrated Ontology of Symptom Phenotypes for Semantic Integration of Traditional Chinese Medical Data. CoRR (2024)
Fenghui Zhang, Kuo Yang, Chenqian Zhao, Haixu Li, Xin Dong, Haoyu Tian, Xuezhong Zhou
Benchmarking Biomedical Relation Knowledge in Large Language Models. ISBRA (2) (2024)
Xin Dong, Chenxi Zhao, Xinpeng Song, Lei Zhang, Yu Liu, Jun Wu, Yiran Xu, Ning Xu, Jialing Liu, Haibin Yu, Kuo Yang, Xuezhong Zhou
PresRecST: a novel herbal prescription recommendation algorithm for real-world patients with integration of syndrome differentiation and treatment planning. J. Am. Medical Informatics Assoc. 31 (6) (2024)
Xinyan Wang, Kuo Yang, Ting Jia, Fanghui Gu, Chongyu Wang, Kuan Xu, Zixin Shu, Jianan Xia, Qiang Zhu, Xuezhong Zhou
KDGene: knowledge graph completion for disease gene prediction using interactional tensor decomposition. Briefings Bioinform. 25 (3) (2024)
Xingzhi Zhou, Xin Dong, Chunhao Li, Yuning Bai, Yulong Xu, Ka Chun Cheung, Simon See, Xinpeng Song, Runshun Zhang, Xuezhong Zhou, Nevin L. Zhang
TCM-FTP: Fine-Tuning Large Language Models for Herbal Prescription Prediction. CoRR (2024)
Xinyan Wang, Ting Jia, Chongyu Wang, Kuan Xu, Zixin Shu, Kuo Yang, Xuezhong Zhou
Knowledge Graph Completion based on Tensor Decomposition for Disease Gene Prediction. CoRR (2023)
Kuo Yang, Yuxia Yang, Shuyue Fan, Jianan Xia, Qiguang Zheng, Xin Dong, Jun Liu, Qiong Liu, Lei Lei, Yingying Zhang, Bing Li, Zhuye Gao, Runshun Zhang, Baoyan Liu, Zhong Wang, Xuezhong Zhou
DRONet: effectiveness-driven drug repositioning framework using network embedding and ranking learning. Briefings Bioinform. 24 (1) (2023)
Kezhi Lu, Kuo Yang, Hailong Sun, Qian Zhang, Qiguang Zheng, Kuan Xu, Jianxin Chen, Xuezhong Zhou
SympGAN: A systematic knowledge integration system for symptom-gene associations network. Knowl. Based Syst. 276 (2023)
Ning Xu, Kunyu Zhong, Kai Chang, Lifeng Fa, Jinlong Yu, Haibin Yu, Xuezhong Zhou, Lei Zhang
Classification Characteristics of COPD Based on Combination of Disease and Syndrome in Real World. BIBM (2023)
Kuo Yang, Zecong Yu, Xin Su, Xiong He, Ning Wang, Qiguang Zheng, Feidie Yu, Zhuang Liu, Tiancai Wen, Xuezhong Zhou
A optimization framework for herbal prescription planning based on deep reinforcement learning. CoRR (2023)
Kuan Xu, Kuo Yang, Hanyang Dong, Xinyan Wang, Xuezhong Zhou
A Pre-training Framework for Knowledge Graph Completion. CoRR (2023)
Rui Hua, Xinyan Wang, Chuang Cheng, Qiang Zhu, Xuezhong Zhou
A Chemical Domain Knowledge-Aware Framework for Multi-view Molecular Property Prediction. CCKS (Evaluation Track) (2022)
Qiguang Zheng, Qifan Shen, Xin Su, Kuo Yang, Zixin Shu, Xuezhong Zhou
RESurv: A Deep Survival Analysis Model to Reveal Population Heterogeneity by Individual Risk. BIBM (2022)
Kuo Yang, Yi Zheng, Kezhi Lu, Kai Chang, Ning Wang, Zixin Shu, Jian Yu, Baoyan Liu, Zhuye Gao, Xuezhong Zhou
PDGNet: Predicting Disease Genes Using a Deep Neural Network With Multi-View Features. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (1) (2022)
Yu Tian, Qi Xie, Runshun Zhang, Xuezhong Zhou, Tiancai Wen, Lei Zhang, Xingping Zhang, Bin Wang, Xu Miao, Jie Yang, Baoyan Liu
Research and Implementation of Real World Traditional Chinese Medicine Clinical Scientific Research Information Electronic Medical Record Sharing System. BIBM (2022)
Ting Jia, Yuxia Yang, Xi Lu, Qiang Zhu, Kuo Yang, Xuezhong Zhou
Link Prediction based on Tensor Decomposition for the Knowledge Graph of COVID-19 Antiviral Drug. Data Intell. 4 (1) (2022)
Peng Li, Haoran Zhang, Wuxia Zhang, Yuanyuan Zhang, Lingmin Zhan, Ning Wang, Caiping Chen, Bangze Fu, Jinzhong Zhao, Xuezhong Zhou, Shuzhen Guo, Jianxin Chen
TMNP: a transcriptome-based multi-scale network pharmacology platform for herbal medicine. Briefings Bioinform. 23 (1) (2022)
Xin Dong, Yi Zheng, Zixin Shu, Kai Chang, Dengying Yan, Jianan Xia, Qiang Zhu, Kunyu Zhong, Xinyan Wang, Kuo Yang, Xuezhong Zhou
TCMPR: TCM Prescription recommendation based on subnetwork term mapping and deep learning. BIBM (2021)
Yang Yang, Fangyuan Dai, Xin Ma, Xue Yu, Xuezhong Zhou, Ping Li
COX-2 as the key target of LianXia NingXin Formula for treating Sympathetic Remodeling after Myocardial Infarction: pharmacological network prediction with experimental validation. BIBM (2021)
Qunsheng Zou, Kuo Yang, Kai Chang, Xiaoping Zhang, Xiaodong Li, Xuezhong Zhou
Phenonizer: A fine-grained phenotypic named entity recognizer for Chinese clinical texts. BIBM (2021)
Yifei Wang, Ying Xing, Min Pi, Runshun Zhang, Xiong He, Xuezhong Zhou, Motan Qiu, Tiancai Wen
Analysis of diabetic comorbidities and their interrelationships in 5227 Chinese patients with type 2 diabetes. BIBM (2020)
Kezhi Lu, Kuo Yang, Edouard Niyongabo, Zixin Shu, Jingjing Wang, Kai Chang, Qunsheng Zou, Jiyue Jiang, Caiyan Jia, Baoyan Liu, Xuezhong Zhou
Integrated network analysis of symptom clusters across disease conditions. J. Biomed. Informatics 107 (2020)
Shiwen Ma, Kuo Yang, Ning Wang, Qiang Zhu, Zhuye Gao, Runshun Zhang, Baoyan Liu, Xuezhong Zhou
Disease phenotype synonymous prediction through network representation learning from PubMed database. Artif. Intell. Medicine 102 (2020)
Yinyan Wang, Kuo Yang, Zixin Shu, Dengying Yan, Xuezhong Zhou
Network-based gene prediction for TCM symptoms. BIBM (2020)
Yang Wu, Feilong Zhang, Kuo Yang, Shuangsang Fang, Dechao Bu, Hui Li, Liang Sun, Hairuo Hu, Kuo Gao, Wei Wang, Xuezhong Zhou, Yi Zhao, Jianxin Chen
SymMap: an integrative database of traditional Chinese medicine enhanced by symptom mapping. Nucleic Acids Res. 47 (Database-Issue) (2019)
Zixin Shu, Wenwen Liu, Huikun Wu, Mingzhong Xiao, Deng Wu, Ting Cao, Meng Ren, Junxiu Tao, Chuhua Zhang, Tangqing He, Xiaodong Li, Runshun Zhang, Xuezhong Zhou
Symptom-based network classification identifies distinct clinical subgroups of liver diseases with common molecular pathways. Comput. Methods Programs Biomed. 174 (2019)
Kuo Yang, Ruyu Wang, Guangming Liu, Zixin Shu, Ning Wang, Runshun Zhang, Jian Yu, Jianxin Chen, Xiaodong Li, Xuezhong Zhou
HerGePred: Heterogeneous Network Embedding Representation for Disease Gene Prediction. IEEE J. Biomed. Health Informatics 23 (4) (2019)
Yisha Lan, Yimin Ding, Xin Luo, Yanzhao Zhang, Chenxi Huang, E. Y. K. Ng, Weihong Huang, Xuezhong Zhou, Jie Su, Yonghong Peng, Zhicheng Wang, Yongqiang Cheng, Wenliang Che
A Clustering Based Transfer Function for Volume Rendering Using Gray-Gradient Mode Histogram. IEEE Access 7 (2019)
Lili Xu, Weilian Kong, Yinghui Wang, Xiaofeng Sun, Xuezhong Zhou, Runshun Zhang, Yanxing Xue, Weibin Wang
Discovery of Xuantoujiedu Decoction and its Molecular Mechanisms Using Integrated Network Analysis. BIBM (2018)
Kuo Yang, Ning Wang, Guangming Liu, Ruyu Wang, Jian Yu, Runshun Zhang, Jianxin Chen, Xuezhong Zhou
Heterogeneous network embedding for identifying symptom candidate genes. J. Am. Medical Informatics Assoc. 25 (11) (2018)
Mengfei Guo, Yanan Yu, Tiancai Wen, Xiaoping Zhang, Baoyan Liu, Jin Zhang, Runshun Zhang, Yanning Zhang, Xuezhong Zhou
Analysis of Disease Comorbidity Patterns in a Large-Scale China Population. ICIC (2) (2018)
Kuo Yang, Guangming Liu, Ning Wang, Runshun Zhang, Jian Yu, Jianxin Chen, Xuezhong Zhou
Heterogeneous network propagation for herb target identification. BMC Medical Informatics Decis. Mak. 18 (S-1) (2018)
Edward W. Huang, Sheng Wang, Doris J. Lee, Runshun Zhang, Baoyan Liu, Xuezhong Zhou, ChengXiang Zhai
Framing Electronic Medical Records as Polylingual Documents in Query Expansion. AMIA (2017)
Guangming Liu, Bianfang Chai, Kuo Yang, Xuezhong Zhou, Jian Yu
Overlapping Functional Modules Detection in PPI Network with Pairwise Constrained Nonnegative Matrix Tri-Factorization. BCB (2017)
Wei Ma, Lu Zhang, Pan Zeng, Chuanbo Huang, Jianwei Li, Bin Geng, Jichun Yang, Wei Kong, Xuezhong Zhou, Qinghua Cui
An analysis of human microbe-disease associations. Briefings Bioinform. 18 (1) (2017)
Edward W. Huang, Sheng Wang, Bingxue Li, Ran Zhang, Baoyan Liu, Runshun Zhang, Jie Liu, Xuezhong Zhou, Hongsheng Lin, ChengXiang Zhai
HEMnet: Integration of Electronic Medical Records with Molecular Interaction Networks and Domain Knowledge for Survival Analysis. BCB (2017)
Sheng Wang, Edward W. Huang, Runshun Zhang, Xiaoping Zhang, Baoyan Liu, Xuezhong Zhou, ChengXiang Zhai
A conditional probabilistic model for joint analysis of symptoms, diseases, and herbs in traditional Chinese medicine patient records. BIBM (2016)
Shiwen Ma, Kuo Yang, Xuezhong Zhou, Xue Xu, Wenwen Liu
Similarity-based algorithms for Disease Terminology Mapping. BIBM (2016)
Edward W. Huang, Sheng Wang, Runshun Zhang, Baoyan Liu, Xuezhong Zhou, ChengXiang Zhai
PaReCat: Patient Record Subcategorization for Precision Traditional Chinese Medicine. BCB (2016)
Huaiyu Wan, Marie-Francine Moens, Walter Luyten, Xuezhong Zhou, Qiaozhu Mei, Lu Liu, Jie Tang
Extracting relations from traditional Chinese medicine literature via heterogeneous entity networks. J. Am. Medical Informatics Assoc. 23 (2) (2016)
Kuo Yang, Xuezhong Zhou, Runshun Zhang, Baoyan Liu, Lei Lei, Xiaoping Zhang, Hongwei Chu, Changkai Sun, Zhuye Gao, Hao Xu
Integrating herb effect similarity for network-based herb target prediction. BMEI (2015)
Jian Wang, Xiaoping Zhang, Biyan Liang, Xuezhong Zhou, Jiaming Lu, Liran Xu, Xin Deng, Xiuhui Li, Li Wang, Xinghua Tan, Yuxiang Mao, Guoliang Zhang, Junwen Wang, Xiaodong Li, Yuguang Wang
Regularity of herbal formulae for HIV/AIDS patients with syndromes based on complex networks. CIBD (2014)
Lizhi Feng, Xuezhong Zhou, Haixun Qi, Runshun Zhang, Yinghui Wang, Baoyan Liu
Development of large-scale TCM corpus using hybrid named entity recognition methods for clinical phenotype detection: An initial study. CIBD (2014)
Guanli Song, Yinghui Wang, Runshun Zhang, Baoyan Liu, Xuezhong Zhou, Guanbo Song, Liang Xie, Xinghuan Huang
Methods and technologies of traditional Chinese medicine clinical information datamation in real world. CIBD (2014)
Yubing Li, Xuezhong Zhou, Runshun Zhang, Yinghui Wang, Jingqing Hu, Qi Xie, Baoyan Liu
Complex network approach for analyzing TCM clinical herb-symptom relationships. BIBM (2013)
Lei Zhang, Yi-guo Wang, Qi-Ming Zhang, Xuezhong Zhou, Jian Yu, Xiuhua Guo, Xia Li
Frequent itemsets compressing based on minimum cover: An efficient method for mining medication law of Chinese herbs. BIBM (2013)
Qi Feng, Xuezhong Zhou, Houkuan Huang, Xiaoping Zhang, Runshun Zhang
Modelling traditional Chinese medicine therapy planning with POMDP. Int. J. Funct. Informatics Pers. Medicine 4 (2) (2013)
Xing Li, Xuezhong Zhou, Yonghong Peng, Runshun Zhang, Jingqing Hu, Jian Yu, Baoyan Liu
Integrating phenotype-genotype data for prioritization of candidate symptom genes. BIBM (2013)
Kai Liu, Xuezhong Zhou, Yan Feng, Jie Liu
Clinical data preprocessing and case studies of POMDP for TCM treatment knowledge discovery. Healthcom (2012)
Zaixing Jiang, Xuezhong Zhou, Xiaoping Zhang, Shibo Chen
Using link topic model to analyze traditional Chinese Medicine Clinical symptom-herb regularities. Healthcom (2012)
Lanxin Bi, Xuezhong Zhou, Lei Zhang, Runshun Zhang
Multidimensional analysis for Traditional Chinese Medicine diagnosis and treatment on hepatitis diseases. Healthcom (2012)
Xishui Pan, Xuezhong Zhou, Hongmei Song, Runshun Zhang, Tingting Zhang
Enhanced data extraction, transforming and loading processing for Traditional Chinese Medicine clinical data warehouse. Healthcom (2012)
Xiaoping Zhang, Xuezhong Zhou, Runshun Zhang, Baoyan Liu, Qi Xie
Real-world clinical data mining on TCM clinical diagnosis and treatment: A survey. Healthcom (2012)
Huaxin Shi, Qi Xie, Xiaodong Li, Baoyan Liu, Shusong Mao, Xuezhong Zhou
Constructing ideas of health service platform for the elderly. Healthcom (2012)
Simon K. Poon, Josiah Poon, Martin McGrane, Xuezhong Zhou, Paul Wing Hing Kwan, Runsun Zhang, Baoyan Liu, Junbin Gao, Clement Loy, Kelvin Chan, Daniel Man-yuen Sze
A novel approach in discovering significant interactions from TCM patient prescription data. Int. J. Data Min. Bioinform. 5 (4) (2011)
Josiah Poon, Dawei Yin, Simon K. Poon, Xuezhong Zhou, Runshun Zhang, Baoyan Liu, Daniel Man-yuen Sze
Co-evolutionary genetic algorithm in symptom-herb relationship discovery. BIBM Workshops (2011)
Simon K. Poon, Kei Fan, Josiah Poon, Clement Loy, Kelvin Chan, Paul Wing Hing Kwan, Xuezhong Zhou, Junbin Gao, Runsun Zhang, Yinghui Runshun, Daniel Man-yuen Sze
Analysis of herbal formulation in TCM: Infertility as a case study. BIBM Workshops (2011)
Ninglin Du, Xuezhong Zhou, Runshun Zhang, Caiyan Jia, Jian Yu, Baoyan Liu
Multiscale backbone based network comparison algorithm for effective herbal interaction analysis. BMEI (2011)
Xuezhong Zhou, Josiah Poon, Paul Wing Hing Kwan, Runsun Zhang, Yinghui Wang, Simon K. Poon, Baoyan Liu, Daniel Man-yuen Sze
Novel Two-Stage Analytic Approach in Extraction of Strong Herb-Herb Interactions in TCM Clinical Treatment of Insomnia. ICMB (2010)
Josiah Poon, Simon K. Poon, Dawei Yin, Kelvin Chan, Clement Loy, Xuezhong Zhou, Runshun Zhang, Baoyan Liu, Paul Kwan, Daniel Man-yuen Sze, Junbin Gao
Studying herb-herb interaction for insomnia through the theory of complementarities. BIBM Workshops (2010)
Ping Li, Xuezhong Zhou, Ronglin Gao, Sa Wu
Empirical study on treatment of Coronary Heart Disease with famous doctors' method of regulating spleen and stomach based on simplified point-wise mutual information. BIBM Workshops (2010)
Xuezhong Zhou, Yonghong Peng, Baoyan Liu
Text mining for traditional Chinese medical knowledge discovery: A survey. J. Biomed. Informatics 43 (4) (2010)
Xuezhong Zhou, Shibo Chen, Baoyan Liu, Runsun Zhang, Yinghui Wang, Ping Li, Yufeng Guo, Hua Zhang, Zhuye Gao, Xiufeng Yan
Development of traditional Chinese medicine clinical data warehouse for medical knowledge discovery and decision support. Artif. Intell. Medicine 48 (2-3) (2010)
Martin McGrane, Simon K. Poon, Josiah Poon, Kelvin Chan, Clement Loy, Xuezhong Zhou, Runshun Zhang, Baoyan Liu, Paul Kwan, Daniel Man-yuen Sze, Junbin Gao
Analysis of synergistic and antagonistic effects of TCM: Cases on diabetes and insomnia. BIBM Workshops (2010)
Xuezhong Zhou, Runsun Zhang, Yinghui Wang, Ping Li, Baoyan Liu
Network Analysis for Core Herbal Combination Knowledge Discovery from Clinical Chinese Medical Formulae. DBTA (2009)
Xuezhong Zhou, Baoyan Liu
Network Analysis System for Traditional Chinese Medicine Clinical Data. BMEI (2009)
Qi Feng, Xuezhong Zhou, Houkuan Huang, Xiaoping Zhang
An Uncertainty-Based Belief Selection Method for POMDP Value Iteration. ECSQARU (2009)
Xuezhong Zhou, Baoyan Liu, Yinghui Wang, Runsun Zhang, Ping Li, Shibo Chen, Yufeng Guo, Zhuye Gao, Hua Zhang
Building Clinical Data Warehouse for Traditional Chinese Medicine Knowledge Discovery. BMEI (1) (2008)
Xuezhong Zhou, Baoyan Liu, Zhaohui Wu, Yi Feng
Integrative mining of traditional Chinese medicine literature and MEDLINE for functional gene networks. Artif. Intell. Medicine 41 (2) (2007)
Yi Feng, Zhaohui Wu, Xuezhong Zhou, Zhongmei Zhou, Weiyu Fan
Knowledge discovery in traditional Chinese medicine: State of the art and perspectives. Artif. Intell. Medicine 38 (3) (2006)
Xuezhong Zhou, Baoyan Liu, Zhaohui Wu
Text Mining for Clinical Chinese Herbal Medical Knowledge Discovery. Discovery Science (2005)
Junli Chen, Xuezhong Zhou, Zhaohui Wu
A Multi-Label Chinese Text Categorization System Based on Boosting Algorithm. CIT (2004)
Xuezhong Zhou, Zhaohui Wu, Aining Yin, Lancheng Wu, Weiyu Fan, Ruen Zhang
Ontology development for unified traditional Chinese medical language system. Artif. Intell. Medicine 32 (1) (2004)
Xuezhong Zhou, Zhaohui Wu
Distributional Character Clustering for Chinese Text Categorization. PRICAI (2004)
Zhaohui Wu, Xuezhong Zhou, Baoyan Liu, Junli Chen
Text Mining for Finding Functional Community of Related Genes Using TCM Knowledge. PKDD (2004)
Xuezhong Zhou, Zhaohui Wu, Wei Lu
TCMMDB: a distributed multidatabase query system and its key technique implemention. SMC (2001)