Xiaoquan Su

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 7

Top Topics

Pattern Detection

Model Selection

Clustering Framework

Top Venues

Genom. Proteom. Bioinform.

Publications

Xianghu Jia, Weiwen Luo, Jiaqi Li, Jieqi Xing, Hongjie Sun, Shunyao Wu, Xiaoquan Su
A deep learning framework for predicting disease-gene associations with functional modules and graph augmentation. BMC Bioinform. 25 (1) (2024)
Shunyao Wu, Zhiruo Li, Yuzhu Chen, Mingqian Zhang, Yangyang Sun, Jieqi Xing, Fengyang Zhao, Shi Huang, Rob Knight, Xiaoquan Su
Host-Variable-Embedding Augmented Microbiome-Based Simultaneous Detection of Multiple Diseases by Deep Learning. Adv. Intell. Syst. 5 (12) (2023)
Mingqian Zhang, Wenke Zhang, Yuzhu Chen, Jin Zhao, Shunyao Wu, Xiaoquan Su
Flex Meta-Storms elucidates the microbiome local beta-diversity under specific phenotypes. Bioinform. 39 (4) (2023)
Gongchao Jing, Yufeng Zhang, Ming Yang, Lu Liu, Jian Xu, Xiaoquan Su
Dynamic Meta-Storms enables comprehensive taxonomic and phylogenetic comparison of shotgun metagenomes at the species level. Bioinform. 36 (7) (2020)
Gabriel H. Murillo, Na You, Xiaoquan Su, Wei Cui, Muredach P. Reilly, Mingyao Li, Kang Ning, Xinping Cui
MultiGeMS: detection of SNVs from multiple samples using model selection on high-throughput sequencing data. Bioinform. 32 (10) (2016)
Xiaoquan Su, Xiaojun Wang, Gongchao Jing, Shi Huang, Jian Xu, Kang Ning
Application of Meta-Mesh on the analysis of microbial communities from human associated-habitats. Quant. Biol. 3 (1) (2015)
Shiwei Sun, Xuetao Wang, Xin Gao, Lihui Ren, Xiaoquan Su, Dongbo Bu, Kang Ning
Condensing Raman spectrum for single-cell phenotype analysis. BMC Bioinform. 16 (S18) (2015)
Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning
Microbial community pattern detection in human body habitats via ensemble clustering framework. BMC Syst. Biol. 8 (S-4) (2014)
Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning
Microbial community pattern detection in human body habitats via ensemble clustering framework. CoRR (2014)
Xinwei Cheng, Xiaohua Chen, Xiaoquan Su, Huanxin Zhao, Maozhen Han, Cunpei Bo, Jian Xu, Hong Bai, Kang Ning
DNA Extraction Protocol for Biological Ingredient Analysis of Liuwei Dihuang Wan. Genom. Proteom. Bioinform. 12 (3) (2014)
Qian Zhou, Xiaoquan Su, Gongchao Jing, Kang Ning
Meta-QC-Chain: Comprehensive and Fast Quality Control Method for Metagenomic Data. Genom. Proteom. Bioinform. 12 (1) (2014)
Xiaoquan Su, Xuetao Wang, Gongchao Jing, Kang Ning
GPU-Meta-Storms: computing the structure similarities among massive amount of microbial community samples using GPU. Bioinform. 30 (7) (2014)
Xiaoquan Su, Jian Xu, Kang Ning
Parallel-META: efficient metagenomic data analysis based on high-performance computation. BMC Syst. Biol. 6 (S-1) (2012)
Xiaoquan Su, Jian Xu, Kang Ning
Meta-Storms: efficient search for similar microbial communities based on a novel indexing scheme and similarity score for metagenomic data. Bioinform. 28 (19) (2012)
Wei Fang, Xingzhi Chang, Xiaoquan Su, Jian Xu, Deli Zhang, Kang Ning
A machine learning framework of functional biomarker discovery for different microbial communities based on metagenomic data. ISB (2012)
Na You, Gabriel H. Murillo, Xiaoquan Su, Xiaowei Zeng, Jian Xu, Kang Ning, Shoudong Zhang, Jiankang Zhu, Xinping Cui
SNP calling using genotype model selection on high-throughput sequencing data. Bioinform. 28 (5) (2012)
Xiaoquan Su, Yongzheng Ma, Hongwei Yang, Xingzhi Chang, Kai Nan, Jian Xu, Kang Ning
An Open-source Collaboration Environment for Metagenomics Research. eScience (2011)