Tsukasa Fukunaga

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 10

Top Topics

Latent Dirichlet Allocation

Top Venues

J. Comput. Biol.

Publications

Kaisei Hara, Natsuki Iwano, Tsukasa Fukunaga, Michiaki Hamada
DeepRaccess: high-speed RNA accessibility prediction using deep learning. Frontiers Bioinform. 3 (2023)
Tsukasa Fukunaga, Wataru Iwasaki
Mirage 2.0: fast and memory-efficient reconstruction of gene-content evolution considering heterogeneous evolutionary patterns among gene families. Bioinform. 38 (16) (2022)
Shion Hosoda, Tsukasa Fukunaga, Michiaki Hamada
Umibato: estimation of time-varying microbial interaction using continuous-time regression hidden Markov model. Bioinform. 37 (Supplement) (2021)
Koichi Mori, Haruka Ozaki, Tsukasa Fukunaga
MotiMul: A significant discriminative sequence motif discovery algorithm with multiple testing correction. BIBM (2020)
Taro Matsutani, Yuki Ueno, Tsukasa Fukunaga, Michiaki Hamada
Discovering novel mutation signatures by latent Dirichlet allocation with variational Bayes inference. Bioinform. 35 (22) (2019)
Tsukasa Fukunaga, Michiaki Hamada
A Novel Method for Assessing the Statistical Significance of RNA-RNA Interactions Between Two Long RNAs. J. Comput. Biol. 25 (9) (2018)
Tsukasa Fukunaga, Michiaki Hamada
RIblast: an ultrafast RNA-RNA interaction prediction system based on a seed-and-extension approach. Bioinform. 33 (17) (2017)
Tsukasa Fukunaga, Wataru Iwasaki
Inactivity periods and postural change speed can explain atypical postural change patterns of Caenorhabditis elegans mutants. BMC Bioinform. 18 (1) (2017)
Michiaki Hamada, Yukiteru Ono, Hisanori Kiryu, Kengo Sato, Yuki Kato, Tsukasa Fukunaga, Ryota Mori, Kiyoshi Asai
Rtools: a web server for various secondary structural analyses on single RNA sequences. Nucleic Acids Res. 44 (Webserver-Issue) (2016)
Tsukasa Fukunaga, Shoko Kubota, Shoji Oda, Wataru Iwasaki
GroupTracker: Video tracking system for multiple animals under severe occlusion. Comput. Biol. Chem. 57 (2015)