Stacy Ciufo

Publication Activity (10 Years)

Years Active: 2009-2020
Publications (10 Years): 8

Top Topics

Genome Annotation

Top Venues

Database J. Biol. Databases Curation

Nucleic Acids Res.

Publications

Conrad L. Schoch, Stacy Ciufo, Michael Domrachev, Carol L. Hotton, Sivakumar Kannan, Rogneda Khovanskaya, Detlef Leipe, Richard McVeigh, Kathleen O'Neill, Barbara Robbertse, Shobha Sharma, Vladimir Soussov, John P. Sullivan, Lu Sun, Seán Turner, Ilene Karsch-Mizrachi
NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database J. Biol. Databases Curation 2020 (2020)
Shobha Sharma, Stacy Ciufo, Elena Starchenko, Dakshesh Darji, Larry Chlumsky, Ilene Karsch-Mizrachi, Conrad L. Schoch
The NCBI BioCollections Database. Database J. Biol. Databases Curation 2019 (2019)
Shobha Sharma, Stacy Ciufo, Elena Starchenko, Dakshesh Darji, Larry Chlumsky, Ilene Karsch-Mizrachi, Conrad L. Schoch
The NCBI BioCollections Database. Database J. Biol. Databases Curation 2018 (2018)
Barbara Robbertse, Pooja K. Strope, Priscila Chaverri, Romina Gazis, Stacy Ciufo, Michael Domrachev, Conrad L. Schoch
Improving taxonomic accuracy for fungi in public sequence databases: applying 'one name one species' in well-defined genera with Trichoderma/Hypocrea as a test case. Database J. Biol. Databases Curation 2017 (2017)
Sefa Kiliç, Dinara M. Sagitova, Shoshannah Wolfish, Benoit Bely, Mélanie Courtot, Stacy Ciufo, Tatiana A. Tatusova, Claire O'Donovan, Marcus C. Chibucos, Maria Jesus Martin, Ivan Erill
From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF. Database J. Biol. Databases Curation 2016 (2016)
Nuala A. O'Leary, Mathew W. Wright, J. Rodney Brister, Stacy Ciufo, Diana Haddad, Richard McVeigh, Bhanu Rajput, Barbara Robbertse, Brian Smith-White, Danso Ako-Adjei, Alexander Astashyn, Azat Badretdin, Yiming Bao, Olga Blinkova, Vyacheslav Brover, Vyacheslav Chetvernin, Jinna Choi, Eric Cox, Olga D. Ermolaeva, Catherine M. Farrell, Tamara Goldfarb, Tripti Gupta, Daniel H. Haft, Eneida Hatcher, Wratko Hlavina, Vinita S. Joardar, Vamsi K. Kodali, Wenjun Li, Donna R. Maglott, Patrick Masterson, Kelly M. McGarvey, Michael R. Murphy, Kathleen O'Neill, Shashikant Pujar, Sanjida H. Rangwala, Daniel Rausch, Lillian D. Riddick, Conrad L. Schoch, Andrei Shkeda, Susan S. Storz, Hanzhen Sun, Françoise Thibaud-Nissen, Igor Tolstoy, Raymond E. Tully, Anjana R. Vatsan, Craig Wallin, David Webb, Wendy Wu, Melissa J. Landrum, Avi Kimchi, Tatiana A. Tatusova, Michael DiCuccio, Paul A. Kitts, Terence D. Murphy, Kim D. Pruitt
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. Nucleic Acids Res. 44 (Database-Issue) (2016)
Leonid Zaslavsky, Stacy Ciufo, Boris Fedorov, Tatiana A. Tatusova
Clustering analysis of proteins from microbial genomes at multiple levels of resolution. BMC Bioinform. 17 (S-8) (2016)
Tatiana A. Tatusova, Stacy Ciufo, Scott Federhen, Boris Fedorov, Richard McVeigh, Kathleen O'Neill, Igor Tolstoy, Leonid Zaslavsky
Update on RefSeq microbial genomes resources. Nucleic Acids Res. 43 (Database-Issue) (2015)
Tatiana A. Tatusova, Stacy Ciufo, Boris Fedorov, Kathleen O'Neill, Igor Tolstoy
RefSeq microbial genomes database: new representation and annotation strategy. Nucleic Acids Res. 42 (Database-Issue) (2014)
William Klimke, Richa Agarwala, Azat Badretdin, Slava Chetvernin, Stacy Ciufo, Boris Fedorov, Boris Kiryutin, Kathleen O'Neill, Wolfgang Resch, Sergei Resenchuk, Susan Schafer, Igor Tolstoy, Tatiana A. Tatusova
The National Center for Biotechnology Information's Protein Clusters Database. Nucleic Acids Res. 37 (Database-Issue) (2009)