Shoudan Liang

Publication Activity (10 Years)

Years Active: 2000-2017
Publications (10 Years): 1

Top Topics

High Throughput Sequencing

Bayesian Models

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Guoshuai Cai, Shoudan Liang, Xiaofeng Zheng, Feifei Xiao
Local sequence and sequencing depth dependent accuracy of RNA-seq reads. BMC Bioinform. 18 (1) (2017)
Yanxun Xu, Xiaofeng Zheng, Yuan Yuan, Marcos R. Estecio, Jean-Pierre Issa, Peng Qiu, Yuan Ji, Shoudan Liang
BM-SNP: A Bayesian Model for SNP Calling Using High Throughput Sequencing Data. IEEE ACM Trans. Comput. Biol. Bioinform. 11 (6) (2014)
Yuan Ji, Riten Mitra, Fernando Quintana, Alejandro Jara, Peter Müller, Ping Liu, Yue Lu, Shoudan Liang
BM-BC: a Bayesian method of base calling for Solexa sequence data. BMC Bioinform. 13 (S-13) (2012)
Guoshuai Cai, Hua Li, Yue Lu, Xuelin Huang, Juhee Lee, Peter Müller, Yuan Ji, Shoudan Liang
Accuracy of RNA-Seq and its dependence on sequencing depth. BMC Bioinform. 13 (S-13) (2012)
Hua Li, Xiao Su, Juan J. Gallegos, Yue Lu, Yuan Ji, Jeffrey J. Molldrem, Shoudan Liang
dsPIG: a tool to predict imprinted genes from the deep sequencing of whole transcriptomes. BMC Bioinform. 13 (2012)
Yanxun Xu, Xiaofeng Zheng, Yuan Yuan, Marcos R. Estecio, Jean-Pierre Issa, Yuan Ji, Shoudan Liang
A Bayesian model for SNP discovery based on next-generation sequencing data. GENSiPS (2012)
Shoudan Liang
Genome-Wide Analysis of Epigenetic Modifications. J. Comput. Sci. Technol. 25 (1) (2009)
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng, Hao Li, Shoudan Liang
fREDUCE: Detection of degenerate regulatory elements using correlation with expression. BMC Bioinform. 8 (2007)
Shoudan Liang
cWINNOWER Algorithm for Finding Fuzzy DNA Motifs. CSB (2003)
Patrik D'haeseleer, Shoudan Liang, Roland Somogyi
Genetic network inference: from co-expression clustering to reverse engineering. Bioinform. 16 (8) (2000)