Shilin Zhao

Publication Activity (10 Years)

Years Active: 2013-2024
Publications (10 Years): 31

Top Topics

Cancer Diagnosis

Partial Discharge

Top Venues

Briefings Bioinform.

Publications

Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao, Jialin Yue, Juming Xiong, Lining Yu, Yifei Wu, Mengmeng Yin, Yu Wang, Shilin Zhao, Yucheng Tang, Haichun Yang, Yuankai Huo
PrPSeg: Universal Proposition Learning for Panoramic Renal Pathology Segmentation. CoRR (2024)
Lining Yu, Mengmeng Yin, Ruining Deng, Quan Liu, Tianyuan Yao, Can Cui, Yu Wang, Yaohong Wang, Shilin Zhao, Haichun Yang, Yuankai Huo
Adapting Mouse Pathological Model to Human Glomerular Lesion Segmentation. CoRR (2024)
Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao, Juming Xiong, Shunxing Bao, Hao Li, Mengmeng Yin, Yu Wang, Shilin Zhao, Yucheng Tang, Haichun Yang, Yuankai Huo
HATs: Hierarchical Adaptive Taxonomy Segmentation for Panoramic Pathology Image Analysis. CoRR (2024)
Muhao Liu, Chenyang Qi, Shunxing Bao, Quan Liu, Ruining Deng, Yu Wang, Shilin Zhao, Haichun Yang, Yuankai Huo
Evaluation Kidney Layer Segmentation on Whole Slide Imaging using Convolutional Neural Networks and Transformers. CoRR (2023)
Jiayuan Chen, Yu Wang, Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao, Yilin Liu, Jianyong Zhong, Agnes B. Fogo, Haichun Yang, Shilin Zhao, Yuankai Huo
Spatial Pathomics Toolkit for Quantitative Analysis of Podocyte Nuclei with Histology and Spatial Transcriptomics Data in Renal Pathology. CoRR (2023)
Ruining Deng, Can Cui, Quan Liu, Tianyuan Yao, Lucas W. Remedios, Shunxing Bao, Bennett A. Landman, Lee E. Wheless, Lori A. Coburn, Keith T. Wilson, Yaohong Wang, Shilin Zhao, Agnes B. Fogo, Haichun Yang, Yucheng Tang, Yuankai Huo
Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging. CoRR (2023)
Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao, Jun Long, Zuhayr Asad, R. Michael Womick, Zheyu Zhu, Agnes B. Fogo, Shilin Zhao, Haichun Yang, Yuankai Huo
Omni-Seg: A Scale-Aware Dynamic Network for Renal Pathological Image Segmentation. IEEE Trans. Biomed. Eng. 70 (9) (2023)
Jianwei Li, Xinwei Deng, Shilin Zhao, Ziyu Wang, Xinyue Wang
Ultra-Low-Loss Graphene Coated Optical Fiber Polarizer with PMMA Enhancement. OECC/PSC (2022)
Yao Ma, Shilin Zhao, Weixiao Wang, Yaoman Li, Irwin King
Multimodality in meta-learning: A comprehensive survey. Knowl. Based Syst. 250 (2022)
Quan Liu, Bryan A. Millis, Zuhayr Asad, Can Cui, William F. Dean, Isabelle T. Smith, Christopher Madden, Joseph T. Roland, Jeffrey P. Zwerner, Shilin Zhao, Lee E. Wheless, Yuankai Huo
Integrate memory efficiency methods for self-supervised learning on pathological image analysis. Medical Imaging: Image Processing (2022)
Shih-Kai Chu, Shilin Zhao, Yu Shyr, Qi Liu
Comprehensive evaluation of noise reduction methods for single-cell RNA sequencing data. Briefings Bioinform. 23 (2) (2022)
Can Cui, Han Liu, Quan Liu, Ruining Deng, Zuhayr Asad, Yaohong Wang, Shilin Zhao, Haichun Yang, Bennett A. Landman, Yuankai Huo
Survival Prediction of Brain Cancer with Incomplete Radiology, Pathology, Genomics, and Demographic Data. CoRR (2022)
Can Cui, Zuhayr Asad, William F. Dean, Isabelle T. Smith, Christopher Madden, Shunxing Bao, Bennett A. Landman, Joseph T. Roland, Lori A. Coburn, Keith T. Wilson, Jeffrey P. Zwerner, Shilin Zhao, Lee E. Wheless, Yuankai Huo
Multi-modal learning with missing data for cancer diagnosis using histopathological and genomic data. Medical Imaging: Computer-Aided Diagnosis (2022)
Can Cui, Haichun Yang, Yaohong Wang, Shilin Zhao, Zuhayr Asad, Lori A. Coburn, Keith T. Wilson, Bennett A. Landman, Yuankai Huo
Deep Multi-modal Fusion of Image and Non-image Data in Disease Diagnosis and Prognosis: A Review. CoRR (2022)
Can Cui, Han Liu, Quan Liu, Ruining Deng, Zuhayr Asad, Yaohong Wang, Shilin Zhao, Haichun Yang, Bennett A. Landman, Yuankai Huo
Survival Prediction of Brain Cancer with Incomplete Radiology, Pathology, Genomic, and Demographic Data. MICCAI (5) (2022)
Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao, Jun Long, Zuhayr Asad, R. Michael Womick, Zheyu Zhu, Agnes B. Fogo, Shilin Zhao, Haichun Yang, Yuankai Huo
Omni-Seg+: A Scale-aware Dynamic Network for Pathological Image Segmentation. CoRR (2022)
Kai Zhou, Yao Fu, Guangya Zhu, Shilin Zhao, Lu Lu, Xianjin Wang, Yuan Li, Pengfei Meng, Shiyu Ma
Partial Discharge Localization on Power Cables Based on a Novel Signal Relay System. IEEE Trans. Instrum. Meas. 71 (2022)
Kaifeng Pang, Zuhayr Asad, Shilin Zhao, Yuankai Huo
MAG: A Simple Learning-Based Patient-Level Aggregation Method for Detecting Microsatellite Instability from Whole-Slide Images. ISBI (2022)
Kaifeng Pang, Zuhayr Asad, Shilin Zhao, Yuankai Huo
MAg: a simple learning-based patient-level aggregation method for detecting microsatellite instability from whole-slide images. CoRR (2022)
Quan Liu, Peter C. Louis, Yuzhe Lu, Aadarsh Jha, Mengyang Zhao, Ruining Deng, Tianyuan Yao, Joseph T. Roland, Haichun Yang, Shilin Zhao, Lee E. Wheless, Yuankai Huo
SimTriplet: Simple Triplet Representation Learning with a Single GPU. CoRR (2021)
Xing Li, Haichun Yang, Jiaxin He, Aadarsh Jha, Agnes B. Fogo, Lee E. Wheless, Shilin Zhao, Yuankai Huo
Beds: Bagging Ensemble Deep Segmentation For Nucleus Segmentation With Testing Stage Stain Augmentation. ISBI (2021)
Xing Li, Haichun Yang, Jiaxin He, Aadarsh Jha, Agnes B. Fogo, Lee E. Wheless, Shilin Zhao, Yuankai Huo
BEDS: Bagging ensemble deep segmentation for nucleus segmentation with testing stage stain augmentation. CoRR (2021)
Quan Liu, Peter C. Louis, Yuzhe Lu, Aadarsh Jha, Mengyang Zhao, Ruining Deng, Tianyuan Yao, Joseph T. Roland, Haichun Yang, Shilin Zhao, Lee E. Wheless, Yuankai Huo
SimTriplet: Simple Triplet Representation Learning with a Single GPU. MICCAI (2) (2021)
Yao Ma, Shilin Zhao, Weixiao Wang, Yaoman Li, Irwin King
Multimodality in Meta-Learning: A Comprehensive Survey. CoRR (2021)
Hui Yu, Shilin Zhao, Scott Ness, Huining Kang, Quanhu Sheng, David C. Samuels, Olufunmilola Oyebamiji, Ying-Yong Zhao, Yan Guo
Non-canonical RNA-DNA differences and other human genomic features are enriched within very short tandem repeats. PLoS Comput. Biol. 16 (6) (2020)
Shilin Zhao, Kejiang Ye, Cheng-Zhong Xu
Traffic Classification and Application Identification Based on Machine Learning in Large-Scale Supercomputing Center. HPCC/SmartCity/DSS (2019)
Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr
RnaSeqSampleSize: real data based sample size estimation for RNA sequencing. BMC Bioinform. 19 (1) (2018)
Shilin Zhao, Jing Wang, David C. Samuels, Quanghu Sheng, Yu Shyr, Yan Guo
Strategies for processing and quality control of Illumina genotyping arrays. Briefings Bioinform. 19 (5) (2018)
Shilin Zhao, Ming Li, Xinli Yang
Robust Object Tracking Based on Collaborative Sparse Representation of Multifeature. ICRAI (2017)
Xinli Yang, Ming Li, Shilin Zhao
Facial Expression Recognition Algorithm Based on CNN and LBP Feature Fusion. ICRAI (2017)
Quanhu Sheng, Shilin Zhao, Mingsheng Guo, Yu Shyr
NGSPERL: a semi-automated framework for large scale next generation sequencing data analysis. Int. J. Comput. Biol. Drug Des. 8 (3) (2015)
Shilin Zhao, Yan Guo, Quanhu Sheng, Yu Shyr
Heatmap3: an improved heatmap package with more powerful and convenient features. BMC Bioinform. 15 (S-10) (2014)
Yan Guo, Shilin Zhao, Brian D. Lehmann, Quanhu Sheng, Timothy M. Shaver, Thomas Stricker, Jennifer A. Pietenpol, Yu Shyr
Detection of internal exon deletion with exon Del. BMC Bioinform. 15 (2014)
Qi Liu, Shilin Zhao, Pei-Fang Su, Shyr Yu
Gene and isoform expression signatures associated with tumor stage in kidney renal clear cell carcinoma. BMC Syst. Biol. 7 (S-5) (2013)