Sascha Ott

Publication Activity (10 Years)

Years Active: 1999-2024
Publications (10 Years): 2

Top Topics

Biologically Meaningful

Gene Expression Patterns

Cloud Computing

Top Venues

PLoS Comput. Biol.

Publications

Denise Vlachou, Maria Veretennikova, Laura Usselmann, Vadim Vasilyev, Sascha Ott, Georg A. Bjarnason, Robert Dallmann, Francis Levi, David A. Rand
TimeTeller: A tool to probe the circadian clock as a multigene dynamical system. PLoS Comput. Biol. 20 (2) (2024)
Krzysztof Polanski, Bo Gao, Sam A. Mason, Paul Brown, Sascha Ott, Katherine J. Denby, David L. Wild
Bringing numerous methods for expression and promoter analysis to a public cloud computing service. Bioinform. 34 (5) (2018)
Krzysztof Polanski, Johanna Rhodes, Claire Hill, Peijun Zhang, Dafyd J. Jenkins, Steven J. Kiddle, Aleksey Jironkin, Jim Beynon, Vicky Buchanan-Wollaston, Sascha Ott, Katherine J. Denby
Wigwams: identifying gene modules co-regulated across multiple biological conditions. Bioinform. 30 (7) (2014)
Paul Brown, Laura Baxter, Richard Hickman, Jim Beynon, Jonathan D. Moore, Sascha Ott
MEME-LaB: motif analysis in clusters. Bioinform. 29 (13) (2013)
Hashem Koohy, Nigel P. Dyer, John E. Reid, Georgy Koentges, Sascha Ott
An alignment-free model for comparison of regulatory sequences. Bioinform. 26 (19) (2010)
John E. Reid, Sascha Ott, Lorenz Wernisch
Transcriptional programs: Modelling higher order structure in transcriptional control. BMC Bioinform. 10 (2009)
Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott
On the complexity of deriving position specific score matrices from positive and negative sequences. Discret. Appl. Math. 155 (6-7) (2007)
Kenneth Evans, Sascha Ott, Annika Hansen, Georgy Koentges, Lorenz Wernisch
A comparative study of S/MAR prediction tools. BMC Bioinform. 8 (2007)
Sascha Ott, Annika Hansen, SunYong Kim, Satoru Miyano
Superiority of network motifs over optimal networks and an application to the revelation of gene network evolution. Bioinform. 21 (2) (2005)
Sascha Ott, Seiya Imoto, Satoru Miyano
Finding Optimal Models for Small Gene Networks. Pacific Symposium on Biocomputing (2004)
Sascha Ott, Yoshinori Tamada, Hideo Bannai, Kenta Nakai, Satoru Miyano
Intrasplicing - Analysis of Long Intron Sequences. Pacific Symposium on Biocomputing (2003)
Tatsuya Akutsu, Sascha Ott
Inferring a Union of Halfspaces from Examples. COCOON (2002)
Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott
On the Complexity of Deriving Position Specific Score Matrices from Examples. CPM (2002)
Sascha Ott
Lower Bounds for Approximating Shortest Superstrings over an Alphabet of Size 2. WG (1999)