Sandhya Prabhakaran

Publication Activity (10 Years)

Years Active: 2010-2022
Publications (10 Years): 6

Top Topics

Gene Expression

Bucket Elimination

Haplotype Inference

Gene Regulatory Networks

Top Venues

J. Comput. Biol.

Publications

Sandhya Prabhakaran, Chandler Gatenbee, Alexander R. A. Anderson
Developing tools for analyzing and viewing multiplexed images. Patterns 3 (7) (2022)
Sandhya Prabhakaran, Chandler Gatenbee, Mark Robertson-Tessi, Jeffrey West, Amer A. Beg, Jhanelle Gray, Scott Antonia, Robert A. Gatenby, Alexander R. A. Anderson
Mistic: An open-source multiplexed image t-SNE viewer. Patterns 3 (7) (2022)
Cassandra Burdziak, Elham Azizi, Sandhya Prabhakaran, Dana Pe'er
A Nonparametric Multi-view Model for Estimating Cell Type-Specific Gene Regulatory Networks. CoRR (2019)
Sandhya Prabhakaran, Julia E. Vogt
Bayesian Clustering for HIV1 Protease Inhibitor Contact Maps. AIME (2019)
Abdoulaye Baniré Diallo, Engelbert Mephu Nguifo, Wajdi Dhifli, Elham Azizi, Sandhya Prabhakaran, Wesley Tansey
Selected Papers from the Workshop on Computational Biology: Joint with the International Joint Conference on Artificial Intelligence and the International Conference on Machine Learning, 2018. J. Comput. Biol. 26 (6) (2019)
Sandhya Prabhakaran, Elham Azizi, Ambrose Carr, Dana Pe'er
Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data. ICML (2016)
Julia E. Vogt, Marius Kloft, Stefan Stark, Sudhir Raman, Sandhya Prabhakaran, Volker Roth, Gunnar Rätsch
Probabilistic clustering of time-evolving distance data. Mach. Learn. 100 (2-3) (2015)
Julia E. Vogt, Marius Kloft, Stefan Stark, Sudhir Raman, Sandhya Prabhakaran, Volker Roth, Gunnar Rätsch
Probabilistic Clustering of Time-Evolving Distance Data. CoRR (2015)
Sandhya Prabhakaran, Mélanie Rey, Osvaldo Zagordi, Niko Beerenwinkel, Volker Roth
HIV Haplotype Inference Using a Propagating Dirichlet Process Mixture Model. IEEE ACM Trans. Comput. Biol. Bioinform. 11 (1) (2014)
Armin Töpfer, Osvaldo Zagordi, Sandhya Prabhakaran, Volker Roth, Eran Halperin, Niko Beerenwinkel
Probabilistic Inference of Viral Quasispecies Subject to Recombination. J. Comput. Biol. 20 (2) (2013)
Sandhya Prabhakaran, David Adametz, Karin J. Metzner, Alexander Böhm, Volker Roth
Recovering networks from distance data. Mach. Learn. 92 (2-3) (2013)
Sandhya Prabhakaran, Karin J. Metzner, Alexander Böhm, Volker Roth
Recovering Networks from Distance Data. ACML (2012)
Osvaldo Zagordi, Armin Töpfer, Sandhya Prabhakaran, Volker Roth, Eran Halperin, Niko Beerenwinkel
Probabilistic Inference of Viral Quasispecies Subject to Recombination. RECOMB (2012)
Sandhya Prabhakaran, Sudhir Raman, Julia E. Vogt, Volker Roth
Automatic Model Selection in Archetype Analysis. DAGM/OAGM Symposium (2012)
Julia E. Vogt, Sandhya Prabhakaran, Thomas J. Fuchs, Volker Roth
The Translation-invariant Wishart-Dirichlet Process for Clustering Distance Data. ICML (2010)