Rohit Singh

ORCID

Publication Activity (10 Years)

Years Active: 1999-2023
Publications (10 Years): 5

Top Venues

CoRR

Bioinform.

ICLR

Trans. Mach. Learn. Res.

Massachusetts Institute of Technology, Cambridge, MA, USA (PHD)

Education History

Massachusetts Institute of Technology, Cambridge, MA, USA

PHD

Publications

Samuel Sledzieski, Kapil Devkota, Rohit Singh, Lenore Cowen, Bonnie Berger
TT3D: Leveraging precomputed protein 3D sequence models to predict protein-protein interactions. Bioinform. 39 (10) (2023)
Alexander P. Wu, Thomas Markovich, Bonnie Berger, Nils Yannick Hammerla, Rohit Singh
Causally-guided Regularization of Graph Attention Improves Generalizability. Trans. Mach. Learn. Res. 2023 (2023)
Alexander P. Wu, Thomas Markovich, Bonnie Berger, Nils Hammerla, Rohit Singh
Causally-guided Regularization of Graph Attention Improves Generalizability. CoRR (2022)
Rohit Singh, Alexander P. Wu, Bonnie Berger
Granger causal inference on DAGs identifies genomic loci regulating transcription. CoRR (2022)
Alexander P. Wu, Rohit Singh, Bonnie Berger
Granger causal inference on DAGs identifies genomic loci regulating transcription. ICLR (2022)
Raghavendra Hosur, Rohit Singh, Bonnie Berger
Sparse estimation for structural variability. Algorithms Mol. Biol. 6 (2011)
Daniel Park, Rohit Singh, Michael Baym, Chung-Shou Liao, Bonnie Berger
IsoBase: a database of functionally related proteins across PPI networks. Nucleic Acids Res. 39 (Database-Issue) (2011)
Raghavendra Hosur, Rohit Singh, Bonnie Berger
Sparse Estimation for Structural Variability. WABI (2010)
Rohit Singh, Daniel Park, Jinbo Xu, Raghavendra Hosur, Bonnie Berger
Struct2Net: a web service to predict protein-protein interactions using a structure-based approach. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Chung-Shou Liao, Kanghao Lu, Michael Baym, Rohit Singh, Bonnie Berger
IsoRankN: spectral methods for global alignment of multiple protein networks. Bioinform. 25 (12) (2009)
Rohit Singh, Jinbo Xu, Bonnie Berger
Global alignment of multiple protein interaction networks with application to functional orthology detection. Proc. Natl. Acad. Sci. USA 105 (35) (2008)
Bonnie Berger, Rohit Singh, Jinbo Xu
Graph algorithms for biological systems analysis. SODA (2008)
Rohit Singh, Jinbo Xu, Bonnie Berger
Global Alignment of Multiple Protein Interaction Networks. Pacific Symposium on Biocomputing (2008)
Rohit Singh, Jinbo Xu, Bonnie Berger
Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology. RECOMB (2007)
Beckett W. Sterner, Rohit Singh, Bonnie Berger
Predicting and Annotating Catalytic Residues: An Information Theoretic Approach. J. Comput. Biol. 14 (8) (2007)
David A. Sontag, Rohit Singh, Bonnie Berger
Probabilistic Modeling of Systematic Errors in Two-Hybrid Experiments. Pacific Symposium on Biocomputing (2007)
Rohit Singh, Jinbo Xu, Bonnie Berger
Struct2Net: Integrating Structure into Protein-Protein Interaction Prediction. Pacific Symposium on Biocomputing (2006)
Rohit Singh, Bonnie Berger
ChainTweak: Sampling from the Neighbourhood of a Protein Conformation. Pacific Symposium on Biocomputing (2005)
Rohit Singh, Nathan P. Palmer, David K. Gifford, Bonnie Berger, Ziv Bar-Joseph
Active learning for sampling in time-series experiments with application to gene expression analysis. ICML (2005)
Rohit Singh, Mitul Saha
Identifying Structural Motifs in Proteins. Pacific Symposium on Biocomputing (2003)
Ankur Lahoti, Rohit Singh, Amitabha Mukerjee
Multi-Dimensional Interval Algebra with Symmetry for Describing Block Layouts. GREC (1999)

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Publication Activity (10 Years)

Top Topics

Top Venues

Rohit Singh