Kapil Devkota

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 7

Top Topics

Protein Interaction

Global Alignment

Top Venues

SIAM J. Math. Data Sci.

Publications

Kapil Devkota, Anselm Blumer, Xiaozhe Hu, Lenore Cowen
Fast Approximate IsoRank for Scalable Global Alignment of Biological Networks. RECOMB (2024)
Samuel Sledzieski, Kapil Devkota, Rohit Singh, Lenore Cowen, Bonnie Berger
TT3D: Leveraging precomputed protein 3D sequence models to predict protein-protein interactions. Bioinform. 39 (10) (2023)
Kapil Devkota, Henri Schmidt, Matthew Werenski, James M. Murphy, Mert Erden, Victor Arsenescu, Lenore J. Cowen
GLIDER: function prediction from GLIDE-based neighborhoods. Bioinform. 38 (13) (2022)
Mert Erden, Megan Gelement, Sarrah Hakimjee, Kyla Levin, Mary-Joy Sidhom, Kapil Devkota, Lenore J. Cowen
Neighborhood embedding and re-ranking of disease genes with ADAGIO. BCB (2022)
Lenore Cowen, Kapil Devkota, Xiaozhe Hu, James M. Murphy, Kaiyi Wu
Diffusion State Distances: Multitemporal Analysis, Fast Algorithms, and Applications to Biological Networks. SIAM J. Math. Data Sci. 3 (1) (2021)
Kapil Devkota, James M. Murphy, Lenore J. Cowen
GLIDE: combining local methods and diffusion state embeddings to predict missing interactions in biological networks. Bioinform. 36 (Supplement-1) (2020)
Lenore Cowen, Kapil Devkota, Xiaozhe Hu, James M. Murphy, Kaiyi Wu
Diffusion State Distances: Multitemporal Analysis, Fast Algorithms, and Applications to Biological Networks. CoRR (2020)