Pieter Audenaert

Publication Activity (10 Years)

Years Active: 2006-2024
Publications (10 Years): 16

Top Topics

Regulatory Elements

Arbitrary Length

Error Correction

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Kenneth Stoop, Mario Pickavet, Didier Colle, Pieter Audenaert
The dynamic stochastic container drayage problem with truck appointment scheduling. OR Spectr. 46 (3) (2024)
Aranka Steyaert, Pieter Audenaert, Jan Fostier
Improved Node and Arc Multiplicity Estimation in De Bruijn Graphs Using Approximate Inference in Conditional Random Fields. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (3) (2023)
Kenneth Stoop, Mario Pickavet, Didier Colle, Pieter Audenaert
A Real-Time Collaborative System For Container Trucks In The Port Of Antwerp: A Large Scale Simulation. ITSC (2022)
Simon Van den Eynde, Jeroen Verbrugghe, Pieter Audenaert, Ben Derudder, Didier Colle, Mario Pickavet
A low-memory alternative for time-dependent Dijkstra. ITSC (2020)
Aranka Steyaert, Pieter Audenaert, Jan Fostier
Accurate determination of node and arc multiplicities in de bruijn graphs using conditional random fields. BMC Bioinform. 21 (1) (2020)
Yuhui Wu, Pieter Audenaert, Mario Pickavet, Didier Colle
Mirror-aided non-LOS VLC channel characterizations with a time-efficient simulation model. Photonic Netw. Commun. 38 (1) (2019)
Ine Melckenbeeck, Pieter Audenaert, Thomas Van Parys, Yves Van de Peer, Didier Colle, Mario Pickavet
Optimising orbit counting of arbitrary order by equation selection. BMC Bioinform. 20 (1) (2019)
Ine Melckenbeeck, Pieter Audenaert, Didier Colle, Mario Pickavet
Efficiently counting all orbits of graphlets of any order in a graph using autogenerated equations. Bioinform. 34 (8) (2018)
Pieter Stroobant, Pieter Audenaert, Didier Colle, Mario Pickavet
Generating constrained length personalized bicycle tours. 4OR 16 (4) (2018)
Thomas Van Parys, Ine Melckenbeeck, Maarten Houbraken, Pieter Audenaert, Didier Colle, Mario Pickavet, Piet Demeester, Yves Van de Peer
A Cytoscape app for motif enumeration with ISMAGS. Bioinform. 33 (3) (2017)
Giles Miclotte, Stéphane Plaisance, Stephane Rombauts, Yves Van de Peer, Pieter Audenaert, Jan Fostier
OMSim: a simulator for optical map data. Bioinform. 33 (17) (2017)
Sahel Sahhaf, Wouter Tavernier, Dimitri Papadimitriou, Davide Careglio, Alok Kumar, Christian Glacet, David Coudert, Nicolas Nisse, Lluís Fàbrega, Pere Vilà, Miguel Camelo, Pieter Audenaert, Didier Colle, Piet Demeester
Routing at Large Scale: Advances and Challenges for Complex Networks. IEEE Netw. 31 (4) (2017)
Giles Miclotte, Mahdi Heydari, Piet Demeester, Stephane Rombauts, Yves Van de Peer, Pieter Audenaert, Jan Fostier
Jabba: hybrid error correction for long sequencing reads. Algorithms Mol. Biol. 11 (2016)
Dieter De Witte, Jan Van de Velde, Dries Decap, Michiel Van Bel, Pieter Audenaert, Piet Demeester, Bart Dhoedt, Klaas Vandepoele, Jan Fostier
-regulatory elements. Bioinform. 31 (23) (2015)
Maarten Houbraken, Pieter Audenaert, Didier Colle, Mario Pickavet, Karolien Scheerlinck, Isaak Yperman, Steven Logghe
Real-time traffic monitoring by fusing floating car data with stationary detector data. MT-ITS (2015)
Giles Miclotte, Mahdi Heydari, Piet Demeester, Pieter Audenaert, Jan Fostier
Jabba: Hybrid Error Correction for Long Sequencing Reads Using Maximal Exact Matches. WABI (2015)
Simon Dooms, Pieter Audenaert, Jan Fostier, Toon De Pessemier, Luc Martens
In-memory, distributed content-based recommender system. J. Intell. Inf. Syst. 42 (3) (2014)
Sofie Demeyer, Jan Goedgebeur, Pieter Audenaert, Mario Pickavet, Piet Demeester
Speeding up Martins' algorithm for multiple objective shortest path problems. 4OR 11 (4) (2013)
Maarten Houbraken, Sofie Demeyer, Dimitri Staessens, Pieter Audenaert, Didier Colle, Mario Pickavet
Fault tolerant network design inspired by Physarum polycephalum. Nat. Comput. 12 (2) (2013)
Dimitri Papadimitriou, Didier Colle, Pieter Audenaert, Piet Demeester
Geometric information routing. IEEE ANTS (2013)
Dieter De Witte, Michiel Van Bel, Pieter Audenaert, Piet Demeester, Bart Dhoedt, Klaas Vandepoele, Jan Fostier
A Parallel, Distributed-Memory Framework for Comparative Motif Discovery. PPAM (2) (2013)
Pieter Audenaert, Thomas Van Parys, Florian Brondel, Mario Pickavet, Piet Demeester, Yves Van de Peer, Tom Michoel
CyClus3D: a Cytoscape plugin for clustering network motifs in integrated networks. Bioinform. 27 (11) (2011)
Sofie Demeyer, Jan Goedgebeur, Pieter Audenaert, Mario Pickavet, Piet Demeester
The predecessor and the accounting algorithm speed up shortest path calculations in traffic routing applications. ITSC (2010)
Pieter Audenaert, Sofie Verbrugge, Leen Depré, Didier Colle, Ilse Lievens, Mario Pickavet, Piet Demeester, W. Derijnck, P. Van Hecke, J. Valcke, J. Torreele
Next Generation Optical Scientific Network. INFOCOM (2006)