Pavel Avdeyev

Publication Activity (10 Years)

Years Active: 2016-2023
Publications (10 Years): 13

Top Topics

Escherichia Coli

Comparative Genomics

Genome Sequencing

Top Venues

Publications

Pavel Avdeyev, Chenlai Shi, Yuhao Tan, Kseniia Dudnyk, Jian Zhou
Dirichlet Diffusion Score Model for Biological Sequence Generation. ICML (2023)
Pavel Avdeyev, Chenlai Shi, Yuhao Tan, Kseniia Dudnyk, Jian Zhou
Dirichlet Diffusion Score Model for Biological Sequence Generation. CoRR (2023)
Sergey Aganezov, Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev
Orienting Ordered Scaffolds: Complexity and Algorithms. SN Comput. Sci. 3 (4) (2022)
Zaineb Chelly Dagdia, Pavel Avdeyev, Md. Shamsuzzoha Bayzid
Biological computation and computational biology: survey, challenges, and discussion. Artif. Intell. Rev. 54 (6) (2021)
Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev
A unified ILP framework for core ancestral genome reconstruction problems. Bioinform. 36 (10) (2020)
Pavel Avdeyev, Max A. Alekseyev
Linearization of Ancestral Genomes with Duplicated Genes. BCB (2020)
Pavel Avdeyev, Maria Atamanova, Max A. Alekseyev
A Uniform Theory of Adequate Subgraphs for the Genome Median, Halving, and Aliquoting Problems. AlCoB (2019)
Sergey Aganezov, Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev
Orienting Ordered Scaffolds: Complexity and Algorithms. CoRR (2019)
Anton Nekhai, Maria Atamanova, Pavel Avdeyev, Max A. Alekseyev
A Rapid Exact Solution for the Guided Genome Halving Problem. BCB (2018)
Pavel Avdeyev, Shuai Jiang, Max A. Alekseyev
Implicit Transpositions in DCJ Scenarios. BCB (2018)
Pavel Avdeyev, Nikita Alexeev, Yongwu Rong, Max A. Alekseyev
A Unified ILP Framework for Genome Median, Halving, and Aliquoting Problems Under DCJ. RECOMB-CG (2017)
Nikita Alexeev, Pavel Avdeyev, Max A. Alekseyev
Comparative genomics meets topology: a novel view on genome median and halving problems. BMC Bioinform. 17 (S-14) (2016)
Pavel Avdeyev, Shuai Jiang, Sergey Aganezov Jr., Fei Hu, Max A. Alekseyev
Reconstruction of Ancestral Genomes in Presence of Gene Gain and Loss. J. Comput. Biol. 23 (3) (2016)