Noah A. Rosenberg

Publication Activity (10 Years)

Years Active: 2003-2024
Publications (10 Years): 18

Top Topics

Unsupervised Clustering

Top Venues

Adv. Appl. Math.

J. Comput. Biol.

Discret. Appl. Math.

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Michael R. Doboli, Hsien-Kuei Hwang, Noah A. Rosenberg
Periodic Behavior of the Minimal Colijn-Plazzotta Rank for Trees with a Fixed Number of Leaves. AofA (2024)
Theodore D. Gress, Noah A. Rosenberg
Mathematical constraints on a family of biodiversity measures via connections with Rényi entropy. Biosyst. 237 (2024)
Alessandra Rister Portinari Maranca, Noah A. Rosenberg
Bijections between the multifurcating unlabeled rooted trees and the positive integers. Adv. Appl. Math. 153 (2024)
Filippo Disanto, Michael Fuchs, Chun-Yen Huang, Ariel R. Paningbatan, Noah A. Rosenberg
The distributions under two species-tree models of the total number of ancestral configurations for matching gene trees and species trees. Adv. Appl. Math. 152 (2024)
Lily Agranat-Tamir, Michael Fuchs, Bernhard Gittenberger, Noah A. Rosenberg
Asymptotic Enumeration of Rooted Binary Unlabeled Galled Trees with a Fixed Number of Galls. AofA (2024)
Egor Lappo, Noah A. Rosenberg
A lattice structure for ancestral configurations arising from the relationship between gene trees and species trees. Discret. Appl. Math. 343 (2024)
Xiran Liu, Naama M. Kopelman, Noah A. Rosenberg
A Dirichlet Model of Alignment Cost in Mixed-Membership Unsupervised Clustering. J. Comput. Graph. Stat. 32 (3) (2023)
Shaili Mathur, Noah A. Rosenberg
All galls are divided into three or more parts: recursive enumeration of labeled histories for galled trees. Algorithms Mol. Biol. 18 (1) (2023)
Rohan S. Mehta, Mike Steel, Noah A. Rosenberg
The Probability of Joint Monophyly of Samples of Gene Lineages for All Species in an Arbitrary Species Tree. J. Comput. Biol. 29 (7) (2022)
Egor Alimpiev, Noah A. Rosenberg
-pseudocaterpillar gene trees. Adv. Appl. Math. 131 (2021)
Noah A. Rosenberg
On the Colijn-Plazzotta numbering scheme for unlabeled binary rooted trees. Discret. Appl. Math. 291 (2021)
Zoe M. Himwich, Noah A. Rosenberg
Roadblocked monotonic paths and the enumeration of coalescent histories for non-matching caterpillar gene trees and species trees. Adv. Appl. Math. 113 (2020)
Noah A. Rosenberg
Enumeration of lonely pairs of gene trees and species trees by means of antipodal cherries. Adv. Appl. Math. 102 (2019)
Filippo Disanto, Noah A. Rosenberg
Enumeration of Ancestral Configurations for Matching Gene Trees and Species Trees. J. Comput. Biol. 24 (9) (2017)
Lawrence H. Uricchio, Tandy J. Warnow, Noah A. Rosenberg
An analytical upper bound on the number of loci required for all splits of a species tree to appear in a set of gene trees. BMC Bioinform. 17 (S-14) (2016)
Filippo Disanto, Noah A. Rosenberg
Asymptotic Properties of the Number of Matching Coalescent Histories for Caterpillar-Like Families of Species Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 13 (5) (2016)
Roy Ronen, Glenn Tesler, Ali Akbari, Shay Zakov, Noah A. Rosenberg, Vineet Bafna
Haplotype Allele Frequency (HAF) Score: Predicting Carriers of Ongoing Selective Sweeps Without Knowledge of the Adaptive Allele. RECOMB (2015)
Filippo Disanto, Noah A. Rosenberg
Coalescent Histories for Lodgepole Species Trees. J. Comput. Biol. 22 (10) (2015)
Cuong V. Than, Noah A. Rosenberg
Mean deep coalescence cost under exchangeable probability distributions. Discret. Appl. Math. 174 (2014)
Filippo Disanto, Noah A. Rosenberg
On the Number of Ranked Species Trees Producing Anomalous Ranked Gene Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 11 (6) (2014)
Noah A. Rosenberg
Coalescent Histories for Caterpillar-Like Families. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (5) (2013)
Luay Nakhleh, Noah A. Rosenberg, Tandy J. Warnow
Session introduction. Pacific Symposium on Biocomputing (2013)
Cuong V. Than, Noah A. Rosenberg
Mathematical Properties of the Deep Coalescence Cost. IEEE ACM Trans. Comput. Biol. Bioinform. 10 (1) (2013)
Naama M. Kopelman, Lewi Stone, Olivier Gascuel, Noah A. Rosenberg
The Behavior of Admixed Populations in Neighbor-Joining Inference of Population Trees. Pacific Symposium on Biocomputing (2013)
James H. Degnan, Noah A. Rosenberg, Tanja Stadler
A Characterization of the Set of Species Trees that Produce Anomalous Ranked Gene Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (6) (2012)
Ethan M. Jewett, Noah A. Rosenberg
iGLASS: An Improvement to the GLASS Method for Estimating Species Trees from Gene Trees. J. Comput. Biol. 19 (3) (2012)
Laura J. Helmkamp, Ethan M. Jewett, Noah A. Rosenberg
Improvements to a Class of Distance Matrix Methods for Inferring Species Trees from Gene Trees. J. Comput. Biol. 19 (6) (2012)
Cuong V. Than, Noah A. Rosenberg
Consistency Properties of Species Tree Inference by Minimizing Deep Coalescences. J. Comput. Biol. 18 (1) (2011)
Zachary A. Szpiech, Mattias Jakobsson, Noah A. Rosenberg
ADZE: a rarefaction approach for counting alleles private to combinations of populations. Bioinform. 24 (21) (2008)
Mattias Jakobsson, Noah A. Rosenberg
CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinform. 23 (14) (2007)
Noah A. Rosenberg
Counting Coalescent Histories. J. Comput. Biol. 14 (3) (2007)
Noah A. Rosenberg
Algorithms for Selecting Informative Marker Panels for Population Assignment. J. Comput. Biol. 12 (9) (2005)
Noah A. Rosenberg, Richard Bagby
Integral over a Simplex: 11039. Am. Math. Mon. 112 (6) (2005)
Noah A. Rosenberg, Richard Stong
Problem 11039. Am. Math. Mon. 110 (8) (2003)