Nan Deng

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 29

Top Topics

Gene Expression

Top Venues

Database J. Biol. Databases Curation

J. Comput. Appl. Math.

Publications

Nan Deng, Wanrong Cao
On strong convergence of two numerical methods for singular initial value problems with multiplicative white noise. J. Comput. Appl. Math. 445 (2024)
Kehui Liu, Nan Deng, Yanxia Wang, Xuejun Tian, Jian Cheng
Subsurface Defect Detection in GPR Data Integrating Temporal and Spatial Features. IEEE J. Sel. Top. Appl. Earth Obs. Remote. Sens. 17 (2024)
Akshay Jajoo, Y. Charlie Hu, Xiaojun Lin, Nan Deng
SLearn: A Case for Task Sampling Based Learning for Cluster Job Scheduling. IEEE Trans. Cloud Comput. 11 (3) (2023)
Nan Deng, An Zeng
Enhancing the robustness of the disruption metric against noise. Scientometrics 128 (4) (2023)
Akshay Jajoo, Y. Charlie Hu, Xiaojun Lin, Nan Deng
A Case for Task Sampling based Learning for Cluster Job Scheduling. NSDI (2022)
Nan Deng, Canglin Wu, Ashraf Yaseen, Hulin Wu
ImmuneData: an integrated data discovery system for immunology data repositories. Database J. Biol. Databases Curation 2022 (2022) (2022)
Nan Deng, Wanrong Cao, Guofei Pang
On numerical methods to second-order singular initial value problems with additive white noise. J. Comput. Appl. Math. 416 (2022)
Nan Deng, Shichao Geng, Shaorui Hao, Qin Zhang, Lanjuan Li
Intelligent diagnosis system for jaundice based on dynamic uncertain causality graph. Int. J. Inf. Commun. Technol. 20 (4) (2022)
Cheng Li, Ming Li, Xinghui Zhu, Yineng Chen, Yanbin Wu, Nan Deng, Kui Fang
Identification Method of Grape Leaf Diseases Based on Improved CCT Model. Int. J. Pattern Recognit. Artif. Intell. 36 (11) (2022)
Nan Deng, Weihua Bai, Yueqiang Sun, Qifei Du, Junming Xia, Xianyi Wang, Congliang Liu, Yuerong Cai, Xiangguang Meng, Cong Yin, Feixiong Huang, Peng Hu, Guangyuan Tan, Xiaoxu Liu
Evaluation of Forward Models for GNSS Radio Occultation Data Processing and Assimilation. Remote. Sens. 14 (5) (2022)
Meiqiang Feng, Nan Deng
Multiple positive doubly periodic solutions to nonlinear telegraph systems. Appl. Math. Lett. 133 (2022)
Yunlong Wang, Yaqi Liu, Qian Xu, Yao Xu, Kai Cao, Nan Deng, Ruimin Wang, Xueying Zhang, Ruiqin Zheng, Guoliang Li, Yaping Fang
TAD boundary and strength prediction by integrating sequence and epigenetic profile information. Briefings Bioinform. 22 (5) (2021)
Noman Bashir, Nan Deng, Krzysztof Rzadca, David E. Irwin, Sree Kodak, Rohit Jnagal
Take it to the limit: peak prediction-driven resource overcommitment in datacenters. EuroSys (2021)
Nan Deng, Qin Zhang
The Application of Dynamic Uncertain Causality Graph Based Diagnosis and Treatment Unification Model in the Intelligent Diagnosis and Treatment of Hepatitis B. Symmetry 13 (7) (2021)
Akshay Jajoo, Y. Charlie Hu, Xiaojun Lin, Nan Deng
The Case for Task Sampling based Learning for Cluster Job Scheduling. CoRR (2021)
Nan Deng, Wendi Luan, Haotian Liu, Bo Tang
CheetahER: A Fast Entity Resolution System for Heterogeneous Camera Data. DI2KG@VLDB (2020)
Braja Gopal Patra, Vahed Maroufy, Babak Soltanalizadeh, Nan Deng, W. Jim Zheng, Kirk Roberts, Hulin Wu
A content-based literature recommendation system for datasets to improve data reusability - A case study on Gene Expression Omnibus (GEO) datasets. J. Biomed. Informatics 104 (2020)
Nan Deng, Luc Pastur, Bernd R. Noack
Low-Dimensional Flow Models from High-Dimensional Flow Data with Machine Learning and First Principles. ERCIM News 2020 (122) (2020)
Muhammad Tirmazi, Adam Barker, Nan Deng, Md E. Haque, Zhijing Gene Qin, Steven Hand, Mor Harchol-Balter, John Wilkes
Borg: the next generation. EuroSys (2020)
Nan Deng, Qin Zhang
Towards Dynamic Uncertain Causality Graphs for the Intelligent Diagnosis and Treatment of Hepatitis B. Symmetry 12 (10) (2020)
Braja Gopal Patra, Babak Soltanalizadeh, Nan Deng, Leqing Wu, Vahed Maroufy, Canglin Wu, W. Jim Zheng, Kirk Roberts, Hulin Wu, Ashraf Yaseen
An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries. Database J. Biol. Databases Curation 2020 (2020)
H. Andrés Lagar-Cavilla, Junwhan Ahn, Suleiman Souhlal, Neha Agarwal, Radoslaw Burny, Shakeel Butt, Jichuan Chang, Ashwin Chaugule, Nan Deng, Junaid Shahid, Greg Thelen, Kamil Adam Yurtsever, Yu Zhao, Parthasarathy Ranganathan
Software-Defined Far Memory in Warehouse-Scale Computers. ASPLOS (2019)
Guocai Chen, Juan Camilo Ramírez, Nan Deng, Xing Qiu, Canglin Wu, W. Jim Zheng, Hulin Wu
Restructured GEO: restructuring Gene Expression Omnibus metadata for genome dynamics analysis. Database J. Biol. Databases Curation 2019 (2019)
Boyu Tan, Junyuan Gu, Hongyan Wei, Li Chen, Sulan Yan, Nan Deng
Electronic medical record-based model to predict the risk of 90-day readmission for patients with heart failure. BMC Medical Informatics Decis. Mak. 19 (1) (2019)
Xiaoyi Tian, Weilin Xie, Xiaocheng Wang, Jie Qin, Nan Deng, Yi Dong, Weisheng Hu
Highly linear analog photonic link based on composite optical phase-locked loop. OFC (2017)
Zichen Xu, Christopher Stewart, Nan Deng, Xiaorui Wang
Blending on-demand and spot instances to lower costs for in-memory storage. INFOCOM (2016)
Manolo Dulva Hina, Hongyu Guan, Nan Deng, Amar Ramdane-Cherif
CASA: Safe and Green Driving Assistance System for Real-Time Driving Events. IntelliSys (1) (2016)
Manolo Dulva Hina, Hongyu Guan, Amar Ramdane-Cherif, Nan Deng
Secured data processing, notification and transmission in a human-vehicle interaction system. ITSC (2016)
Zhenqiu Liu, Shili Lin, Nan Deng, Dermot P. B. McGovern, Steven T. Piantadosi
Penalty for Network Construction with Omics Data. J. Comput. Biol. 23 (3) (2016)
Zichen Xu, Nan Deng, Christopher Stewart, Xiaorui Wang
CADRE: Carbon-Aware Data Replication for Geo-Diverse Services. ICAC (2015)
Nan Deng, Zichen Xu, Christopher Stewart, Xiaorui Wang
Tell-tale tails: Decomposing response times for live internet services. IGSC (2015)
Nan Deng, Dongxiao Zhu
dSpliceType: A Multivariate Model for Detecting Various Types of Differential Splicing Events Using RNA-Seq. ISBRA (2014)
Nan Deng, Zichen Xu, Christopher Stewart, Xiaorui Wang
From the Outside Looking In: Probing Web APIs to Build Detailed Workload Profiles. Feedback Computing (2014)
Yan Jiao, Xiaoyun Liu, Yanhong Cao, Nan Deng, Yonghui Ma, Karen A. Hasty, John M. Stuart, Weikuan Gu
Analysis of effect of congenic mice on the gene expression under genomic background of BALB/c mice. BMC Bioinform. 15 (S-10) (2014)
Nan Deng, Dongxiao Zhu
Detecting various types of differential splicing events using RNA-Seq data. BCB (2013)
Nan Deng, Zhengguang Xu, Jun Wang
Occluded Face Recognition Based on Dictionary Learning and Sub-classifier Fusion. J. Multim. 8 (5) (2013)
Nan Deng, Dongxiao Zhu
RNA-Seq analyses to reveal the human transcriptome landscape. BCB (2013)
Nan Deng, Christopher Stewart, Daniel Gmach, Martin F. Arlitt
Policy and mechanism for carbon-aware cloud applications. NOMS (2012)
Tin Chi Nguyen, Nan Deng, Dongxiao Zhu
SASeq: A Selective and Adaptive Shrinkage Approach to Detect and Quantify Active Transcripts using RNA-Seq CoRR (2012)
Nan Deng, Christopher Stewart, Daniel Gmach, Martin F. Arlitt, Jaimie Kelley
Adaptive green hosting. ICAC (2012)
Tin Chi Nguyen, Nan Deng, Guorong Xu, Zhansheng Duan, Dongxiao Zhu
iQuant: A fast yet accurate GUI tool for transcript quantification. BIBM Workshops (2011)
Guorong Xu, Nan Deng, Zhiyu Zhao, Thair Judeh, Erik K. Flemington, Dongxiao Zhu
SAMMate: a GUI tool for processing short read alignments in SAM/BAM format. Source Code Biol. Medicine 6 (2011)
Zhiyu Zhao, Tin Chi Nguyen, Nan Deng, Kristen Marie Johnson, Dongxiao Zhu
SPATA: A seeding and patching algorithm for de novo transcriptome assembly. BIBM Workshops (2011)
Zhenyong Fu, Hongtao Lu, Nan Deng, Nengbin Cai
Large Scale Visual Classification via Learned Dictionaries and Sparse Representation. AICI (1) (2010)
Jiongyun Xie, Hongtao Lu, Nan Deng, Nengbin Cai
Sparse Deep Belief Net for Handwritten Digits Classification. AICI (1) (2010)