Mohieddin Jafari

Publication Activity (10 Years)

Years Active: 2015-2022
Publications (10 Years): 11

Top Topics

Network Centrality

Clustering Algorithm

Protein Interaction Networks

Machine Learning Approaches

Top Venues

Briefings Bioinform.

Publications

Ali Amiryousefi, Bernardo Williams, Mohieddin Jafari, Jing Tang
The ENDS of assumptions: an online tool for the epistemic non-parametric drug-response scoring. Bioinform. 38 (11) (2022)
Ayeh Naghizadeh, Mahdi Salamat, Donya Hamzeian, Shaghayegh Akbari, Hossein Rezaeizadeh, Mahdi Alizadeh Vaghasloo, Reza Karbalaei, Mehdi Mirzaie, Mehrdad Karimi, Mohieddin Jafari
IrGO: Iranian traditional medicine General Ontology and knowledge base. J. Biomed. Semant. 12 (1) (2021)
Yinyin Wang, Hongbin Yang, Linxiao Chen, Mohieddin Jafari, Jing Tang
Network-based modeling of herb combinations in traditional Chinese medicine. Briefings Bioinform. 22 (5) (2021)
Bulat Zagidullin, Jehad Aldahdooh, Shuyu Zheng, Wenyu Wang, Yinyin Wang, Joseph Saad, Alina Malyutina, Mohieddin Jafari, ZiaurRehman Tanoli, Alberto Pessia, Jing Tang
DrugComb: an integrative cancer drug combination data portal. Nucleic Acids Res. 47 (Webserver-Issue) (2019)
Minoo Ashtiani, Mehdi Mirzaie, Mohieddin Jafari
CINNA: an R/CRAN package to decipher Central Informative Nodes in Network Analysis. Bioinform. 35 (8) (2019)
Minoo Ashtiani, Payman Nickchi, Soheil Jahangiri-Tazehkand, Abdollah Safari, Mehdi Mirzaie, Mohieddin Jafari
IMMAN: an R/Bioconductor package for Interolog protein network reconstruction, mapping and mining analysis. BMC Bioinform. 20 (1) (2019)
Farnaz Barneh, Mehdi Mirzaie, Payman Nickchi, Tuan Zea Tan, Jean-Paul Thiery, Mehran Piran, Mona Salimi, Fatemeh Goshadrou, Amir R. Aref, Mohieddin Jafari
Integrated use of bioinformatic resources reveals that co-targeting of histone deacetylases, IKBK and SRC inhibits epithelial-mesenchymal transition in cancer. Briefings Bioinform. 20 (2) (2019)
Yinyin Wang, Mohieddin Jafari, Yun Tang, Jing Tang
Predicting Meridian in Chinese traditional medicine using machine learning approaches. PLoS Comput. Biol. 15 (11) (2019)
Minoo Ashtiani, Ali Salehzadeh-Yazdi, Zahra Razaghi-Moghadam, Holger Hennig, Olaf Wolkenhauer, Mehdi Mirzaie, Mohieddin Jafari
A systematic survey of centrality measures for protein-protein interaction networks. BMC Syst. Biol. 12 (1) (2018)
Mohieddin Jafari, Sayed Mohammad Fakhar
Network Centrality Analysis of Tehran Urban and Suburban Railway System. CoRR (2018)
Farnaz Barneh, Mohieddin Jafari, Mehdi Mirzaie
Updates on drug-target network; facilitating polypharmacology and data integration by growth of DrugBank database. Briefings Bioinform. 17 (6) (2016)
Mohieddin Jafari, Mehdi Mirzaie, Mehdi Sadeghi
Interlog protein network: an evolutionary benchmark of protein interaction networks for the evaluation of clustering algorithms. BMC Bioinform. 16 (2015)
Payman Nickchi, Mohieddin Jafari, Shiva Kalantari
PEIMAN 1.0: Post-translational modification Enrichment, Integration and Matching ANalysis. Database J. Biol. Databases Curation 2015 (2015)