Mohammad-Hadi Foroughmand-Araabi

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 12

Top Topics

Matching Algorithm

Top Venues

J. Bioinform. Comput. Biol.

Publications

Hamed Vasei, Mohammad-Hadi Foroughmand-Araabi, Amir Daneshgar
Weighted centroid trees: a general approach to summarize phylogenies in single-labeled tumor mutation tree inference. Bioinform. 40 (7) (2024)
Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Kasra Alishahi
An Approximation Algorithm for Ancestral Maximum-Likelihood and Phylogeography Inference Problems under Time Reversible Markov Evolutionary Models. CoRR (2023)
Morteza Alimi, Amir Daneshgar, Mohammad-Hadi Foroughmand-Araabi
Mean isoperimetry with control on outliers: Exact and approximation algorithms. Theor. Comput. Sci. 923 (2022)
Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Alice C. McHardy
Scelestial: Fast and accurate single-cell lineage tree inference based on a Steiner tree approximation algorithm. PLoS Comput. Biol. 18 (8) (2022)
Florent Becker, Tom Besson, Jérôme Durand-Lose, Aurélien Emmanuel, Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Shahrzad Heydarshahi
Abstract Geometrical Computation 10: An Intrinsically Universal Family of Signal Machines. ACM Trans. Comput. Theory 13 (1) (2021)
Leila Baghaarabani, Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi, Seyed Peyman Shariatpanahi, Bahram Goliaei
Conifer: clonal tree inference for tumor heterogeneity with single-cell and bulk sequencing data. BMC Bioinform. 22 (1) (2021)
Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Bahram Goliaei
A novel pattern matching algorithm for genomic patterns related to protein motifs. J. Bioinform. Comput. Biol. 18 (1) (2020)
Florent Becker, Jérôme Durand-Lose, Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei
An Intrinsically Universal Family of Signal Machines. CoRR (2018)
Seyed Amir Malekpour, Parsa Pakzad, Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Ruzbeh Tusserkani, Bahram Goliaei, Mehdi Sadeghi
Modeling the probability distribution of the bacterial burst size via a game-theoretic approach. J. Bioinform. Comput. Biol. 16 (4) (2018)
Morteza Alimi, Amir Daneshgar, Mohammad-Hadi Foroughmand-Araabi
n log log n) Approximation Algorithm for Mean Isoperimetry and Robust k-means. CoRR (2018)
Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi
Computational Complexity of Wavelength-Based Machine with Slightly Interacting Sets. Int. J. Unconv. Comput. 13 (2) (2017)
Mohammad-Hadi Foroughmand-Araabi, Bahram Goliaei, Kasra Alishahi, Mehdi Sadeghi, Sama Goliaei
Codon usage and protein sequence pattern dependency in different organisms: A Bioinformatics approach. J. Bioinform. Comput. Biol. 13 (2) (2015)
Mohammad-Hadi Foroughmand-Araabi, Sama Goliaei, Bahram Goliaei
Global Topology of Codon Usage Equality Networks of Escherichia Coli Essential Genes. IWBBIO (2014)
Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi
On the complexity of nonuniform wavelength-based machine. Nat. Comput. 13 (2) (2014)
Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi
Light Ray Concentration Reduces the Complexity of the Wavelength-Based Machine on PSPACE Languages. UCNC (2013)
Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi
Lower Bounds on the Complexity of the Wavelength-Based Machine. UCNC (2012)