Codon usage and protein sequence pattern dependency in different organisms: A Bioinformatics approach.
Mohammad-Hadi Foroughmand-AraabiBahram GoliaeiKasra AlishahiMehdi SadeghiSama GoliaeiPublished in: J. Bioinform. Comput. Biol. (2015)
Keyphrases
- protein sequences
- amino acids
- computational biology
- protein structure and function
- protein structure prediction
- multiple sequence alignment
- sequence analysis
- genome sequences
- dna sequences
- sequence data
- biological processes
- physicochemical properties
- protein structure
- sequence databases
- biological sequences
- secondary structure
- molecular biology
- motif discovery
- amino acid sequences
- protein function
- phylogenetic trees
- protein folding
- transcription factors
- text mining
- sequence alignment
- coarse grained
- protein classification
- structural motifs
- machine learning
- systems biology
- data mining
- pattern discovery
- physico chemical
- string kernels
- protein families
- protein secondary structure
- experimentally determined