Matthew B. Baker

Publication Activity (10 Years)

Years Active: 2014-2022
Publications (10 Years): 12

Top Topics

Benchmark Suite

Simulation Tools

Singular Points

Top Venues

Publications

Wael R. Elwasif, Thomas J. Naughton, Matthew B. Baker
Towards a Standard Process Management Infrastructure for Workflows Using Python. PDCAT (2022)
Jens Glaser, Josh Vincent Vermaas, David M. Rogers, Jeff Larkin, Scott LeGrand, Swen Boehm, Matthew B. Baker, Aaron Scheinberg, Andreas F. Tillack, Mathialakan Thavappiragasam, Ada Sedova, Oscar R. Hernandez
High-throughput virtual laboratory for drug discovery using massive datasets. Int. J. High Perform. Comput. Appl. 35 (5) (2021)
Jens Glaser, Felipe Aramburú, William Malpica, Benjamín Hernández, Matthew B. Baker, Rodrigo Aramburú
Scaling SQL to the Supercomputer for Interactive Analysis of Simulation Data. SMC (2021)
Josh Vincent Vermaas, Ada Sedova, Matthew B. Baker, Swen Boehm, David M. Rogers, Jeff Larkin, Jens Glaser, Micholas Dean Smith, Oscar R. Hernandez, Jeremy C. Smith
Supercomputing Pipelines Search for Therapeutics Against COVID-19. Comput. Sci. Eng. 23 (1) (2021)
Atanu Acharya, Rupesh Agarwal, Matthew B. Baker, Jérôme Baudry, Debsindhu Bhowmik, Swen Böhm, Kendall G. Byler, Sam Yen-Chi Chen, Leighton Coates, Connor J. Cooper, Omar Demerdash, Isabella Daidone, John D. Eblen, Sally R. Ellingson, Stefano Forli, Jens Glaser, James C. Gumbart, John Gunnels, Oscar R. Hernandez, Stephan Irle, D. W. Kneller, A. Kovalevsky, Jeffrey M. Larkin, Travis J. Lawrence, Scott LeGrand, Shih-Hsien Liu, Julie C. Mitchell, Gilchan Park, Jerry M. Parks, Anna Pavlova, Loukas Petridis, Duncan Poole, Line Pouchard, Arvind Ramanathan, David M. Rogers, Diogo Santos-Martins, Aaron Scheinberg, Ada Sedova, Y. Shen, Jeremy C. Smith, Micholas Dean Smith, Carlos Soto, Aristides Tsaris, Mathialakan Thavappiragasam, Andreas F. Tillack, Josh Vincent Vermaas, Van Quan Vuong, Junqi Yin, Shinjae Yoo, Mai Zahran, Laura Zanetti Polzi
Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19. J. Chem. Inf. Model. 60 (12) (2020)
Matthew B. Baker, Oscar R. Hernandez, Jeffrey Young
Co-designing OpenMP Features Using OMPT and Simulation Tools. IWOMP (2020)
Verónica G. Vergara Larrea, Michael J. Brim, Wayne Joubert, Swen Boehm, Matthew B. Baker, Oscar R. Hernandez, Sarp Oral, James Simmons, Don Maxwell
Are we witnessing the spectre of an HPC meltdown? Concurr. Comput. Pract. Exp. 31 (16) (2019)
John R. Ossyra, Ada Sedova, Matthew B. Baker, Jeremy C. Smith
Highly Interactive, Steered Scientific Workflows on HPC Systems: Optimizing Design Solutions. ISC Workshops (2019)
Thomas J. Naughton, Ferrol Aderholdt, Matthew B. Baker, Swaroop Pophale, Manjunath Gorentla Venkata, Neena Imam
Oak Ridge OpenSHMEM Benchmark Suite. OpenSHMEM (2018)
Swen Boehm, Swaroop Pophale, Matthew B. Baker, Manjunath Gorentla Venkata
Merged Requests for Better Performance and Productivity in Multithreaded OpenSHMEM. OpenSHMEM (2017)
Aurélien Bouteiller, Swaroop Pophale, Swen Boehm, Matthew B. Baker, Manjunath Gorentla Venkata
Evaluating Contexts in OpenSHMEM-X Reference Implementation. OpenSHMEM (2017)
Matthew B. Baker, Ferrol Aderholdt, Manjunath Gorentla Venkata, Pavel Shamis
OpenSHMEM-UCX: Evaluation of UCX for Implementing OpenSHMEM Programming Model. OpenSHMEM (2016)
Sreeram Potluri, Davide Rossetti, Donald Becker, Duncan Poole, Manjunath Gorentla Venkata, Oscar R. Hernandez, Pavel Shamis, M. Graham Lopez, Matthew B. Baker, Wendy Poole
Exploring OpenSHMEM Model to Program GPU-based Extreme-Scale Systems. OpenSHMEM (2015)
Matthew B. Baker, Aaron Welch, Manjunath Gorentla Venkata
Parallelizing the Smith-Waterman Algorithm Using OpenSHMEM and MPI-3 One-Sided Interfaces. OpenSHMEM (2015)
Pavel Shamis, Manjunath Gorentla Venkata, M. Graham Lopez, Matthew B. Baker, Oscar R. Hernandez, Yossi Itigin, Mike Dubman, Gilad Shainer, Richard L. Graham, Liran Liss, Yiftah Shahar, Sreeram Potluri, Davide Rossetti, Donald Becker, Duncan Poole, Christopher Lamb, Sameer Kumar, Craig B. Stunkel, George Bosilca, Aurélien Bouteiller
UCX: An Open Source Framework for HPC Network APIs and Beyond. Hot Interconnects (2015)
Matthew B. Baker, Swaroop Pophale, Jean-Charles Vasnier, Haoqiang Jin, Oscar R. Hernandez
Hybrid Programming Using OpenSHMEM and OpenACC. OpenSHMEM (2014)