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Mario Caccamo
Publication Activity (10 Years)
Years Active: 2011-2017
Publications (10 Years): 4
Top Topics
Processing Pipeline
Biological Data
Clustering Gene Expression Data
Data Integration
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Publications
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Lenwood S. Heath
,
Héctor Corrada Bravo
,
Mario Cáccamo
,
Michael Schatz
Bioinformatics of DNA [Scanning the Issue].
Proc. IEEE
105 (3) (2017)
Paul A. Wilkinson
,
Mark O. Winfield
,
Gary L. A. Barker
,
Simon Tyrrell
,
Xingdong Bian
,
Alexandra M. Allen
,
Amanda Burridge
,
Jane A. Coghill
,
Christy Waterfall
,
Mario Cáccamo
,
Robert P. Davey
,
Keith J. Edwards
CerealsDB 3.0: expansion of resources and data integration.
BMC Bioinform.
17 (2016)
Richard M. Leggett
,
Darren Heavens
,
Mario Cáccamo
,
Matthew D. Clark
,
Robert P. Davey
NanoOK: multi-reference alignment analysis of nanopore sequencing data, quality and error profiles.
Bioinform.
32 (1) (2016)
Ricardo H. Ramirez-Gonzalez
,
Cristobal Uauy
,
Mario Cáccamo
PolyMarker: A fast polyploid primer design pipeline.
Bioinform.
31 (12) (2015)
Richard M. Leggett
,
Bernardo J. Clavijo
,
Leah Clissold
,
Matthew D. Clark
,
Mario Cáccamo
NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries.
Bioinform.
30 (4) (2014)
Ricardo Ramirez-Gonzalez
,
Raoul Jean Pierre Bonnal
,
Mario Cáccamo
,
Daniel MacLean
Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments.
Source Code Biol. Medicine
7 (2012)
Ricardo Ramirez-Gonzalez
,
Mario Cáccamo
,
Daniel MacLean
Gee Fu: a sequence version and web-services database tool for genomic assembly, genome feature and NGS data.
Bioinform.
27 (19) (2011)