Marilyn Safran

Publication Activity (10 Years)

Years Active: 1992-2019
Publications (10 Years): 6

Top Topics

Biological Pathways

Complex Diseases

Gene Expression

Top Venues

Database J. Biol. Databases Curation

Publications

Refael Kohen, Jonathan Barlev, Gil Hornung, Gil Stelzer, Ester Feldmesser, Kiril Kogan, Marilyn Safran, Dena Leshkowitz
UTAP: User-friendly Transcriptome Analysis Pipeline. BMC Bioinform. 20 (1) (2019)
Simon Fishilevich, Ron Nudel, Noa Rappaport, Rotem Hadar, Inbar Plaschkes, Tsippi Iny Stein, Naomi Rosen, Asher Kohn, Michal Twik, Marilyn Safran, Doron Lancet, Dana Cohen
GeneHancer: genome-wide integration of enhancers and target genes in GeneCards. Database J. Biol. Databases Curation 2017 (2017)
Noa Rappaport, Michal Twik, Inbar Plaschkes, Ron Nudel, Tsippi Iny Stein, Jacob Levitt, Moran Gershoni, C. Paul Morrey, Marilyn Safran, Doron Lancet
MalaCards: an amalgamated human disease compendium with diverse clinical and genetic annotation and structured search. Nucleic Acids Res. 45 (Database-Issue) (2017)
Simon Fishilevich, Shahar Zimmerman, Asher Kohn, Tsippi Iny Stein, Tsviya Olender, Eugene Kolker, Marilyn Safran, Doron Lancet
Genic insights from integrated human proteomics in GeneCards. Database J. Biol. Databases Curation 2016 (2016)
Noa Rappaport, Michal Twik, Ron Nudel, Inbar Plaschkes, Tsippi Iny Stein, Danit Oz-Levi, Simon Fishilevich, Marilyn Safran, Doron Lancet
Integrated Identification of Disease-Gene Links and their Utility in Next-Generation Sequencing Interpretation. BCB (2016)
Frida Belinky, Noam Nativ, Gil Stelzer, Shahar Zimmerman, Tsippi Iny Stein, Marilyn Safran, Doron Lancet
PathCards: multi-source consolidation of human biological pathways. Database J. Biol. Databases Curation 2015 (2015)
Frida Belinky, Iris Bahir, Gil Stelzer, Shahar Zimmerman, Naomi Rosen, Noam Nativ, Irina Dalah, Tsippi Iny Stein, Noa Rappaport, Toutai Mituyama, Marilyn Safran, Doron Lancet
Non-redundant compendium of human ncRNA genes in GeneCards. Bioinform. 29 (2) (2013)
Noa Rappaport, Noam Nativ, Gil Stelzer, Michal Twik, Yaron Guan-Golan, Tsippi Iny Stein, Iris Bahir, Frida Belinky, C. Paul Morrey, Marilyn Safran, Doron Lancet
MalaCards: an integrated compendium for diseases and their annotation. Database J. Biol. Databases Curation 2013 (2013)
Marilyn Safran, Irina Dalah, Justin Alexander, Naomi Rosen, Tsippi Iny Stein, Michael Shmoish, Noam Nativ, Iris Bahir, Tirza Doniger, Hagit Krug, Alexandra Sirota-Madi, Tsviya Olender, Yaron Golan, Gil Stelzer, Arye Harel, Doron Lancet
GeneCards Version 3: the human gene integrator. Database J. Biol. Databases Curation 2010 (2010)
Arye Harel, Aron Inger, Gil Stelzer, Liora Strichman-Almashanu, Irina Dalah, Marilyn Safran, Doron Lancet
GIFtS: annotation landscape analysis with GeneCards. BMC Bioinform. 10 (2009)
Francesco Ferrari, Stefania Bortoluzzi, Alessandro Coppe, Alexandra Sirota, Marilyn Safran, Michael Shmoish, Sergio Ferrari, Doron Lancet, Gian Antonio Danieli, Silvio Bicciato
Novel definition files for human GeneChips based on GeneAnnot. BMC Bioinform. 8 (2007)
Maxim Shklar, Liora Strichman-Almashanu, Orit Shmueli, Michael Shmoish, Marilyn Safran, Doron Lancet
GeneTide - Terra Incognita Discovery Endeavor: a new transcriptome focused member of the GeneCards/GeneNote suite of databases. Nucleic Acids Res. 33 (Database-Issue) (2005)
Itai Yanai, Hila Benjamin-Rodrig, Michael Shmoish, Vered Chalifa-Caspi, Maxim Shklar, Ron Ophir, Arren Bar-Even, Shirley Horn-Saban, Marilyn Safran, Eytan Domany, Doron Lancet, Orit Shmueli
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification. Bioinform. 21 (5) (2005)
Maxim Shklar, Orit Shmueli, Liora Strichman-Almashanu, Michael Shmoish, Doron Lancet, Marilyn Safran
GeneTide: Terra Incognita Discovery Endeavor Mining ESTs and Expression Data to Elucidate Known and De-Novo GeneCards Genes. CSB (2004)
Josiah Altschuler, Marilyn Safran, Doron Lancet, Lakshmanan Iyer
News section. Briefings Bioinform. 5 (2) (2004)
Naomi Rosen, Vered Chalifa-Caspi, Orit Shmueli, Avital Adato, Michal Lapidot, Julie Stampnitzky, Marilyn Safran, Doron Lancet
GeneLoc: exon-based integration of human genome maps. ISMB (Supplement of Bioinformatics) (2003)
Marilyn Safran, Vered Chalifa-Caspi, Orit Shmueli, Tsviya Olender, Michal Lapidot, Naomi Rosen, Michael Shmoish, Yakov Peter, Gustavo Glusman, Ester Feldmesser, Avital Adato, Inga Peter, Miriam Khen, Tal Atarot, Yoram Groner, Doron Lancet
Human Gene-Centric Databases at the Weizmann Institute of Science: GeneCards, UDB, CroW 21 and HORDE. Nucleic Acids Res. 31 (1) (2003)
Vered Chalifa-Caspi, Orit Shmueli, Hila Benjamin-Rodrig, Naomi Rosen, Michael Shmoish, Itai Yanai, Ron Ophir, Pavel Kats, Marilyn Safran, Doron Lancet
GeneAnnot: Interfacing GeneCards with high-throughput gene expression compendia. Briefings Bioinform. 4 (4) (2003)
Marilyn Safran, Vered Chalifa-Caspi, Orit Shmueli, Naomi Rosen, Hila Benjamin-Rodrig, Ron Ophir, Itai Yanai, Michael Shmoish, Doron Lancet
The GeneCardsTM Family of Databases: GeneCards, GeneLoc, GeneNote and GeneAnnot. CSB (2003)
Marilyn Safran, Irina Solomon, Orit Shmueli, Michal Lapidot, Shai Shen-Orr, Avital Adato, Uri Ben-Dor, Nir Esterman, Naomi Rosen, Inga Peter, Tsviya Olender, Vered Chalifa-Caspi, Doron Lancet
GeneCardsTM 2002: towards a complete, object-oriented, human gene compendium. Bioinform. 18 (11) (2002)
Marilyn Safran, Irina Solomon, Orit Shmueli, Michal Lapidot, Shai Shen-Orr, Avital Adato, Uri Ben-Dor, Nir Esterman, Naomi Rosen, Inga Peter, Tsviya Olender, Vered Chalifa-Caspi, Doron Lancet
GeneCards? 2002: An Evolving Human Gene Compendium. CSB (2002)
Yaron Goldberg, Marilyn Safran, Ehud Shapiro
Active Mail - A Framework for Implementing Groupware. CSCW (1992)