Mareike Thies

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 47

Top Topics

Image Generation

Smoothness Constraint

Bilateral Filter

Top Venues

Bildverarbeitung für die Medizin

Publications

Mareike Thies, Noah Maul, Siyuan Mei, Laura Pfaff, Nastassia Vysotskaya, Mingxuan Gu, Jonas Utz, Dennis Possart, Lukas Folle, Fabian Wagner, Andreas Maier
Differentiable Score-Based Likelihoods: Learning CT Motion Compensation From Clean Images. CoRR (2024)
Laura Pfaff, Fabian Wagner, Julian Hossbach, Elisabeth Preuhs, Mareike Thies, Felix Denzinger, Dominik Nickel, Tobias Wüerfl, Andreas K. Maier
Abstract: Robust Multi-contrast MRI Denoising using Trainable Bilateral Filters without Noise-free Targets. Bildverarbeitung für die Medizin (2024)
Lena Augustin, Fabian Wagner, Mareike Thies, Andreas K. Maier
Neural Network-based Sinogram Upsampling in Real-measured CT Reconstruction. Bildverarbeitung für die Medizin (2024)
Fabian Wagner, Mareike Thies, Laura Pfaff, Oliver Aust, Sabrina Pechmann, Daniela Weidner, Noah Maul, Maximilian Rohleder, Mingxuan Gu, Jonas Utz, Felix Denzinger, Andreas K. Maier
Abstract: Self-supervised CT Dual Domain Denoising using Low-parameter Models. Bildverarbeitung für die Medizin (2024)
Siyuan Mei, Fuxin Fan, Fabian Wagner, Mareike Thies, Mingxuan Gu, Yipeng Sun, Andreas K. Maier
Segmentation-Guided Knee Radiograph Generation using Conditional Diffusion Models. CoRR (2024)
Mareike Thies, Fabian Wagner, Noah Maul, Haijun Yu, Manuela Meier, Linda-Sophie Schneider, Mingxuan Gu, Siyuan Mei, Lukas Folle, Andreas K. Maier
A gradient-based approach to fast and accurate head motion compensation in cone-beam CT. CoRR (2024)
Noah Maul, Annette Birkhold, Fabian Wagner, Mareike Thies, Maximilian Rohleder, Philipp Berg, Markus Kowarschik, Andreas K. Maier
Physics-Informed Learning for Time-Resolved Angiographic Contrast Agent Concentration Reconstruction. CoRR (2024)
Yipeng Sun, Linda-Sophie Schneider, Fuxin Fan, Mareike Thies, Mingxuan Gu, Siyuan Mei, Yuzhong Zhou, Siming Bayer, Andreas K. Maier
Data-Driven Filter Design in FBP: Transforming CT Reconstruction with Trainable Fourier Series. CoRR (2024)
Yipeng Sun, Yixing Huang, Linda-Sophie Schneider, Mareike Thies, Mingxuan Gu, Siyuan Mei, Siming Bayer, Andreas K. Maier
EAGLE: An Edge-Aware Gradient Localization Enhanced Loss for CT Image Reconstruction. CoRR (2024)
Mareike Thies, Fabian Wagner, Noah Maul, Siyuan Mei, Mingxuan Gu, Laura Pfaff, Nastassia Vysotskaya, Haijun Yu, Andreas Maier
On the Influence of Smoothness Constraints in Computed Tomography Motion Compensation. CoRR (2024)
Mareike Thies, Fabian Wagner, Mingxuan Gu, Siyuan Mei, Yixing Huang, Sabrina Pechmann, Oliver Aust, Daniela Weidner, Georgiana Neag, Stefan Uderhardt, Georg Schett, Silke H. Christiansen, Andreas K. Maier
Exploring Epipolar Consistency Conditions. Bildverarbeitung für die Medizin (2024)
Mareike Thies, Fabian Wagner, Noah Maul, Lukas Folle, Manuela Meier, Maximilian Rohleder, Linda-Sophie Schneider, Laura Pfaff, Mingxuan Gu, Jonas Utz, Felix Denzinger, Michael Manhart, Andreas K. Maier
Abstract: Gradient-based Geometry Learning for Fan-beam CT Reconstruction. Bildverarbeitung für die Medizin (2024)
Siyuan Mei, Fuxin Fan, Mareike Thies, Mingxuan Gu, Fabian Wagner, Oliver Aust, Ina Erceg, Zeynab Mirzaei, Georgiana Neag, Yipeng Sun, Yixing Huang, Andreas Maier
Reference-Free Multi-Modality Volume Registration of X-Ray Microscopy and Light-Sheet Fluorescence Microscopy. CoRR (2024)
Maximilian Rohleder, Charlotte Pradel, Fabian Wagner, Mareike Thies, Noah Maul, Felix Denzinger, Andreas K. Maier, Björn W. Kreher
Abstract: Enabling Geometry Aware Learning Through Differentiable Epipolar View Translation. Bildverarbeitung für die Medizin (2024)
Noah Maul, Katharina Zinn, Fabian Wagner, Mareike Thies, Maximilian Rohleder, Laura Pfaff, Markus Kowarschik, Annette Birkhold, Andreas K. Maier
Abstract: Transient Hemodynamics Prediction using an Efficient Octree-based Deep Learning Model. Bildverarbeitung für die Medizin (2024)
Haijun Yu, Song Ni, Mareike Thies, Fabian Wagner, Yixing Huang, Fengling Liu, Andreas K. Maier
Multiple Source Translation Micro-CT Improves Both Field-of-View and Spatial Resolution. IEEE Trans. Instrum. Meas. 73 (2024)
Maximilian Rohleder, Mareike Thies, Sophie Riedl, Benno Bullert, Jula Gierse, Maxim Privalov, Eric Mandelka, Sven Yves Vetter, Andreas K. Maier, Bjoern Kreher
An interactive task-based method for the avoidance of metal artifacts in CBCT. Int. J. Comput. Assist. Radiol. Surg. 19 (7) (2024)
Mareike Thies, Fabian Wagner, Noah Maul, Laura Pfaff, Linda-Sophie Schneider, Christopher Syben, Andreas K. Maier
Optimizing CT Scan Geometries With and Without Gradients. CoRR (2023)
Laura Pfaff, Fabian Wagner, Julian Hossbach, Elisabeth Preuhs, Noah Maul, Mareike Thies, Felix Denzinger, Dominik Nickel, Tobias Würfl, Andreas Maier
Robust Multi-Contrast Mri Denoising Using Trainable Bilateral Filters Without Noise-Free Targets. ISBI (2023)
Noah Maul, Katharina Zinn, Fabian Wagner, Mareike Thies, Maximilian Rohleder, Laura Pfaff, Markus Kowarschik, Annette Birkhold, Andreas K. Maier
Transient Hemodynamics Prediction Using an Efficient Octree-Based Deep Learning Model. CoRR (2023)
Noah Maul, Katharina Zinn, Fabian Wagner, Mareike Thies, Maximilian Rohleder, Laura Pfaff, Markus Kowarschik, Annette Birkhold, Andreas K. Maier
Transient Hemodynamics Prediction Using an Efficient Octree-Based Deep Learning Model. IPMI (2023)
Jonas Utz, Tobias Weise, Maja Schlereth, Fabian Wagner, Mareike Thies, Mingxuan Gu, Stefan Uderhardt, Katharina Breininger
Focus on Content not Noise: Improving Image Generation for Nuclei Segmentation by Suppressing Steganography in CycleGAN. CoRR (2023)
Fabian Wagner, Mareike Thies, Felix Denzinger, Mingxuan Gu, Mayank Patwari, Stefan B. Ploner, Noah Maul, Laura Pfaff, Yixing Huang, Andreas K. Maier
Abstract: Trainable Joint Bilateral Filters for Enhanced Prediction Stability in Low-dose CT. Bildverarbeitung für die Medizin (2023)
Mareike Thies, Fabian Wagner, Mingxuan Gu, Yixing Huang, Sabrina Pechmann, Oliver Aust, Daniela Weidner, Georgiana Neag, Stefan Uderhardt, Georg Schett, Silke H. Christiansen, Andreas K. Maier
Motion Compensation via Epipolar Consistency for In-Vivo X-Ray Microscopy. CoRR (2023)
Mingxuan Gu, Mareike Thies, Fabian Wagner, Sabrina Pechmann, Oliver Aust, Daniela Weidner, Georgiana Neag, Zhaoya Pan, Jonas Utz, Georg Schett, Silke H. Christiansen, Stefan Uderhardt, Andreas K. Maier
Cavity Segmentation in X-ray Microscopy Scans of Mouse Tibiae. Bildverarbeitung für die Medizin (2023)
Fabian Wagner, Mareike Thies, Noah Maul, Laura Pfaff, Oliver Aust, Sabrina Pechmann, Christopher Syben, Andreas K. Maier
Geometric Constraints Enable Self-Supervised Sinogram Inpainting in Sparse-View Tomography. CoRR (2023)
Jonas Utz, Maja Schlereth, Jingna Qiu, Mareike Thies, Fabian Wagner, Oumaima B. Brahim, Mingxuan Gu, Stefan Uderhardt, Katharina Breininger
McLabel - A Local Thresholding Tool for Efficient Semi-automatic Labelling of Cells in Fluorescence Microscopy. Bildverarbeitung für die Medizin (2023)
Maximilian Rohleder, Charlotte Pradel, Fabian Wagner, Mareike Thies, Noah Maul, Felix Denzinger, Andreas K. Maier, Björn W. Kreher
Enabling Geometry Aware Learning Through Differentiable Epipolar View Translation. MICCAI (3) (2023)
Fabian Wagner, Mareike Thies, Laura Pfaff, Noah Maul, Sabrina Pechmann, Mingxuan Gu, Jonas Utz, Oliver Aust, Daniela Weidner, Georgiana Neag, Stefan Uderhardt, Jang Hwan Choi, Andreas Maier
Noise2Contrast: Multi-contrast Fusion Enables Self-supervised Tomographic Image Denoising. IPMI (2023)
Adarsh Raghunath, Fabian Wagner, Mareike Thies, Mingxuan Gu, Sabrina Pechmann, Oliver Aust, Daniela Weidner, Georgiana Neag, Georg Schett, Silke H. Christiansen, Stefan Uderhardt, Andreas K. Maier
Unsupervised Super Resolution in X-ray Microscopy using a Cycle-consistent Generative Model. Bildverarbeitung für die Medizin (2023)
Linda-Sophie Schneider, Mareike Thies, Christopher Syben, Richard Schielein, Mathias Unberath, Andreas K. Maier
Task-based Generation of Optimized Projection Sets using Differentiable Ranking. CoRR (2023)
Fabian Wagner, Mareike Thies, Laura Pfaff, Oliver Aust, Sabrina Pechmann, Daniela Weidner, Noah Maul, Maximilian Rohleder, Mingxuan Gu, Jonas Utz, Felix Denzinger, Andreas Maier
On the Benefit of Dual-Domain Denoising in a Self-Supervised Low-Dose CT Setting. ISBI (2023)
Jonas Utz, Tobias Weise, Maja Schlereth, Fabian Wagner, Mareike Thies, Mingxuan Gu, Stefan Uderhardt, Katharina Breininger
Focus on Content not Noise: Improving Image Generation for Nuclei Segmentation by Suppressing Steganography in CycleGAN. ICCV (Workshops) (2023)
Lukas Folle, Pauline Fenzl, Filippo Fagni, Mareike Thies, Vincent Christlein, Christine Meder, Michael Sticherling, David Simon, Georg Schett, Andreas Maier, Arnd Kleyer
Deepnapsi: Deep Learning for Nail Psoriasis Prediction. ISBI (2023)
Mareike Thies, Fabian Wagner, Noah Maul, Lukas Folle, Manuela Meier, Maximilian Rohleder, Linda-Sophie Schneider, Laura Pfaff, Mingxuan Gu, Jonas Utz, Felix Denzinger, Michael Manhart, Andreas K. Maier
Gradient-Based Geometry Learning for Fan-Beam CT Reconstruction. CoRR (2022)
Mareike Thies, Fabian Wagner, Mingxuan Gu, Lukas Folle, Lina Felsner, Andreas K. Maier
Learned Cone-Beam CT Reconstruction Using Neural Ordinary Differential Equations. CoRR (2022)
Oliver Aust, Mareike Thies, DanielaWeidner, Fabian Wagner, Sabrina Pechmann, Leonid Mill, Darja Andreev, Ippei Miyagawa, Gerhard Krönke, Silke H. Christiansen, Stefan Uderhardt, Andreas K. Maier, Anika Grüneboom
Tibia Cortical Bone Segmentation in Micro-CT and X-ray Microscopy Data Using a Single Neural Network. Bildverarbeitung für die Medizin (2022)
Fabian Wagner, Mareike Thies, Felix Denzinger, Mingxuan Gu, Mayank Patwari, Stefan B. Ploner, Noah Maul, Laura Pfaff, Yixing Huang, Andreas K. Maier
Trainable Joint Bilateral Filters for Enhanced Prediction Stability in Low-dose CT. CoRR (2022)
Mingxuan Gu, Sulaiman Vesal, Mareike Thies, Zhaoya Pan, Fabian Wagner, Mirabela Rusu, Andreas K. Maier, Ronak Kosti
ConFUDA: Contrastive Fewshot Unsupervised Domain Adaptation for Medical Image Segmentation. CoRR (2022)
Fabian Wagner, Mareike Thies, Laura Pfaff, Oliver Aust, Sabrina Pechmann, Daniela Weidner, Noah Maul, Maximilian Rohleder, Mingxuan Gu, Jonas Utz, Felix Denzinger, Andreas K. Maier
On the Benefit of Dual-domain Denoising in a Self-supervised Low-dose CT Setting. CoRR (2022)
Fabian Wagner, Mareike Thies, Laura Pfaff, Noah Maul, Sabrina Pechmann, Mingxuan Gu, Jonas Utz, Oliver Aust, Daniela Weidner, Georgiana Neag, Stefan Uderhardt, Jang Hwan Choi, Andreas K. Maier
Noise2Contrast: Multi-Contrast Fusion Enables Self-Supervised Tomographic Image Denoising. CoRR (2022)
Fabian Wagner, Mareike Thies, Mingxuan Gu, Yixing Huang, Sabrina Pechmann, Mayank Patwari, Stefan B. Ploner, Oliver Aust, Stefan Uderhardt, Georg Schett, Silke H. Christiansen, Andreas K. Maier
Ultra Low-Parameter Denoising: Trainable Bilateral Filter Layers in Computed Tomography. CoRR (2022)
Fabian Wagner, Mareike Thies, Marek Karolczak, Sabrina Pechmann, Yixing Huang, Mingxuan Gu, Lasse Kling, Daniela Weidner, Oliver Aust, Georg Schett, Silke H. Christiansen, Andreas K. Maier
Monte Carlo Dose Simulation for In-Vivo X-Ray Nanoscopy. Bildverarbeitung für die Medizin (2022)
Gabriel Herl, Jochen Hiller, Mareike Thies, Jan-Nico Zaech, Mathias Unberath, Andreas K. Maier
Task-Specific Trajectory Optimisation for Twin-Robotic X-Ray Tomography. IEEE Trans. Computational Imaging 7 (2021)
Mareike Thies, Jan-Nico Zäch, Cong Gao, Russell H. Taylor, Nassir Navab, Andreas K. Maier, Mathias Unberath
A Learning-based Method for Online Adjustment of C-arm Cone-Beam CT Source Trajectories for Artifact Avoidance. CoRR (2020)
Benjamin D. Killeen, Jie Ying Wu, Kinjal Shah, Anna Zapaishchykova, Philipp Nikutta, Aniruddha Tamhane, Shreya Chakraborty, Jinchi Wei, Tiger Gao, Mareike Thies, Mathias Unberath
A County-level Dataset for Informing the United States' Response to COVID-19. CoRR (2020)
Mareike Thies, Jan-Nico Zäch, Cong Gao, Russell H. Taylor, Nassir Navab, Andreas Maier, Mathias Unberath
A learning-based method for online adjustment of C-arm Cone-beam CT source trajectories for artifact avoidance. Int. J. Comput. Assist. Radiol. Surg. 15 (11) (2020)