Mahdi Belcaid

Publication Activity (10 Years)

Years Active: 2007-2024
Publications (10 Years): 11

Top Topics

Accomplish Tasks

Computer Supported Collaborative

Top Venues

PeerJ Comput. Sci.

Publications

William L. Harrigan, Barbra D. Ferrell, K. Eric Wommack, Shawn W. Polson, Zachary D. Schreiber, Mahdi Belcaid
Improvements in viral gene annotation using large language models and soft alignments. BMC Bioinform. 25 (1) (2024)
Mahdi Belcaid, Jason Leigh, Ryan Theriot, Nurit Kirshenbaum, Roderick S. Tabalba, Michael L. Rogers, Andrew E. Johnson, Maxine D. Brown, Luc Renambot, Lance Long, Arthur Nishimoto, Chris North, Jesse Harden
Reflecting on the Scalable Adaptive Graphics Environment Team's 20-Year Translational Research Endeavor in Digital Collaboration Tools. Comput. Sci. Eng. 25 (2) (2023)
Sean B. Cleveland, Cédric Arisdakessian, Craig Nelson, Mahdi Belcaid, Kiana Frank, Gwen A. Jacobs
The C-MĀIKI Gateway: A Modern Science Platform for Analyzing Microbiome Data. PEARC (2022)
Mahdi Belcaid, Alberto Gonzalez Martinez, Jason Leigh
Leveraging deep contrastive learning for semantic interaction. PeerJ Comput. Sci. 8 (2022)
Cédric Arisdakessian, Olivia D. Nigro, Grieg F. Steward, Guylaine Poisson, Mahdi Belcaid
CoCoNet: an efficient deep learning tool for viral metagenome binning. Bioinform. 37 (18) (2021)
Krishna Bharadwaj, Andrew Burks, Andrew E. Johnson, Lance Long, Luc Renambot, Maxine D. Brown, Dylan Kobayashi, Mahdi Belcaid, Nurit Kirshenbaum, Roderick S. Tabalba, Ryan Theriot, Jason Leigh
Securing Collaborative Work in Wide-band Display Environments. CIC (2021)
Nurit Kirshenbaum, Kylie Davidson, Jesse Harden, Chris North, Dylan Kobayashi, Ryan Theriot, Roderick S. Tabalba, Michael L. Rogers, Mahdi Belcaid, Andrew Thomas Burks, Krishna Bharadwaj, Luc Renambot, Andrew E. Johnson, Lance Long, Jason Leigh
Traces of Time through Space: Advantages of Creating Complex Canvases in Collaborative Meetings. Proc. ACM Hum. Comput. Interact. 5 (ISS) (2021)
Mahdi Belcaid, Cédric Arisdakessian, Yuliia Kravchenko
Efficient DNA sequence partitioning using probabilistic subsets and hypergraphs. SAC (2021)
Cédric Arisdakessian, Sean B. Cleveland, Mahdi Belcaid
MetaFlow|mics: Scalable and Reproducible Nextflow Pipelines for the Analysis of Microbiome Marker Data. PEARC (2020)
Jason Leigh, Krishna Bharadwaj, Arthur Nishimoto, Lance Long, Jason Haga, John Burns, Francis Cristobal, Jared McLean, Roberto Pelayo, Mahdi Belcaid, Dylan Kobayashi, Nurit Kirshenbaum, Troy Wooton, Alberto Gonzalez, Luc Renambot, Andrew E. Johnson, Maxine D. Brown, Andrew Burks
Usage Patterns of Wideband Display Environments In e-Science Research, Development and Training. eScience (2019)
Mahdi Belcaid, Guylaine Poisson
A profile-based probabilistic approach for the detection of anomalies in the cytochrome C oxidase I amplicon sequences. SAC (2017)
Philippe Lavoie-Mongrain, Mahdi Belcaid, Aïda Ouangraoua, Anne Bergeron, Guylaine Poisson
Reconstructing the history of a WD40 beta-propeller tandem repeat using a phylogenetically informed algorithm. PeerJ Comput. Sci. 1 (2015)
Mahdi Belcaid, Kyungim Baek, David Haymer, Guylaine Poisson
Efficient clustering of populations using a minimal SNP panel. SAC (2011)
Mahdi Belcaid, Anne Bergeron, Guylaine Poisson
The evolution of the tape measure protein: units, duplications and losses. BMC Bioinform. 12 (S-9) (2011)
Mahdi Belcaid, Anne Bergeron, Guylaine Poisson
Mosaic Graphs and Comparative Genomics in Phage Communities. J. Comput. Biol. 17 (9) (2010)
Mark Menor, Kyungim Baek, Mahdi Belcaid, Yannick Gingras, Guylaine Poisson
Virus DNA-fragment classification using taxonomic hidden Markov model profiles. SAC (2010)
Guylaine Poisson, Mahdi Belcaid, Anne Bergeron
Comparative Genomics and Extensive Recombinations in Phage Communities. RECOMB-CG (2009)
Mahdi Belcaid, Anne Bergeron, Annie Chateau, Cédric Chauve, Yannick Gingras, Guylaine Poisson, M. Vendette
Exploring Genome Rearrangements using Virtual Hybridization. APBC (2007)