Luis Rueda

ORCID

Publication Activity (10 Years)

Years Active: 2000-2022
Publications (10 Years): 43

Top Venues

Publications

Akram Vasighizaker, Sheena Hora, Yash Trivedi, Luis Rueda
Comparative Analysis of Supervised Cell Type Detection in Single-Cell RNA-seq Data. IWBBIO (2) (2022)
Fang-Xiang Wu, Min Li, Lukasz A. Kurgan, Luis Rueda
Guest editorial: Deep neural networks for precision medicine. Neurocomputing 469 (2022)
Forough Firoozbakht, Iman Rezaeian, Luis Rueda, Alioune Ngom
Computationally repurposing drugs for breast cancer subtypes using a network-based approach. BMC Bioinform. 23 (1) (2022)
Ali Abbasi Tadi, Luis Rueda, Dima Alhadidi
NICASN: Non-negative Matrix Factorization and Independent Component Analysis for Clustering Social Networks. AI (2022)
Sudipta Modak, Esam Abdel-Raheem, Luis Rueda
Heart Disease Prediction Using Adaptive Infinite Feature Selection and Deep Neural Networks. ICAIIC (2022)
Juan A. Dominguez, Luis Rueda, Nilson Henao, Kodjo Agbossou, Javier Campillo
Distributed Co-simulation for Smart Homes Energy Management in the Presence of Electrical Thermal Storage. IECON (2022)
Alexandru Filip, Seyedeh Shaghayegh Sadeghi, Alioune Ngom, Luis Rueda
DeePSLiM: A Deep Learning Approach to Identify Predictive Short-linear Motifs for Protein Sequence Classification. CIBCB (2022)
Musab Naik, Luis Rueda, Akram Vasighizaker
Identification of Enriched Regions in ChIP-Seq Data via a Linear-Time Multi-Level Thresholding Algorithm. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (5) (2022)
Luis Rueda, Simon Sansregret, Brice Le Lostec, Kodjo Agbossou, Nilson Henao, Sousso Kelouwani
A Probabilistic Model to Predict Household Occupancy Profiles for Home Energy Management Applications. IEEE Access 9 (2021)
Luis Rueda, Kodjo Agbossou, Nilson Henao, Sousso Kelouwani, Juan C. Oviedo-Cepeda, Brice Le Lostec, Simon Sansregret, Michael Fournier
Online Unsupervised Occupancy Anticipation System Applied to Residential Heat Load Management. IEEE Access 9 (2021)
Ashraf Neisari, Luis Rueda, Sherif Saad
Spam review detection using self-organizing maps and convolutional neural networks. Comput. Secur. 106 (2021)
Sheikh Jubair, Abedalrhman Alkhateeb, Ashraf Abou Tabl, Luis Rueda, Alioune Ngom
A novel approach to identify subtype-specific network biomarkers of breast cancer survivability. Netw. Model. Anal. Health Informatics Bioinform. 9 (1) (2020)
Luis Rueda, Nazia Fatima
iSOM-GSN: An Integrative Approach for Transforming Multi-omic Data into Gene Similarity Networks via Self-organizing Maps. BCB (2020)
Saiteja Danda, Akram Vasighizaker, Luis Rueda
Unsupervised Identification of SARS-CoV-2 Target Cell Groups via Nonlinear Dimensionality Reduction on Single-cell RNA-Seq Data. BIBM (2020)
Nazia Fatima, Luis Rueda
iSOM-GSN: an integrative approach for transforming multi-omic data into gene similarity networks via self-organizing maps. Bioinform. 36 (15) (2020)
Mohammad Anas Shah, Abdala Nour, Alioune Ngom, Luis Rueda
Cancer Detection Based on Image Classification by Using Convolution Neural Network. IWBBIO (2020)
Huy Quang Pham, Luis Rueda, Alioune Ngom
A Data Integration Approach for Detecting Biomarkers of Breast Cancer Survivability. IWBBIO (2020)
Osama Hamzeh, Luis Rueda
A Gene-disease-based Machine Learning Approach to Identify Prostate Cancer Biomarkers. BCB (2019)
Abed Alkhateeb, Nazia Fatima, Govindaraja Atikukke, Sabeena Misra, Luis Rueda
A Deep Learning Model to Identify a Genomic Signature Driving Sporadic Colorectal Cancer in Young Adults. BCB (2019)
Alben Cardenas, Samuel Piché, David Meunier, Luis Rueda, Kodjo Agbossou
On the Occupancy Measurement and Analysis for Residential Applications. ISIE (2019)
Osama Hamzeh, Abedalrhman Alkhateeb, Luis Rueda
Predicting Tumor Locations in Prostate Cancer Tissue Using Gene Expression. IWBBIO (1) (2018)
Sowndarya Krishnamoorthy, Luis Rueda, Sherif Saad, Haytham Elmiligi
Identification of User Behavioral Biometrics for Authentication Using Keystroke Dynamics and Machine Learning. ICBEA (2018)
Yixun Li, Mina Maleki, Nicholas J. Carruthers, Paul M. Stemmer, Alioune Ngom, Luis Rueda
The predictive performance of short-linear motif features in the prediction of calmodulin-binding proteins. BMC Bioinform. (14) (2018)
Sheikh Jubair, Luis Rueda, Alioune Ngom
Identifying suutype specific network-Uiomarkers of breast cancer survivauility. IJCNN (2018)
Ashraf Abou Tabl, Abedalrhman Alkhateeb, Luis Rueda, Waguih H. ElMaraghy, Alioune Ngom
Identification of the Treatment Survivability Gene Biomarkers of Breast Cancer Patients via a Tree-Based Approach. IWBBIO (1) (2018)
Gabriel A. Romero, Cristina Guzman, Luis Rueda, Javier R. Castro, Alben Cárdenas, Kodjo Agbossou
Case Study of Data Management for Power and Energy Monitoring. ISIE (2018)
Cristina Guzman, Luis Rueda, Gabriel A. Romero, Shendra Biscans, Kodjo Agbossou, Alben Cardenas
Enabling winter behavior analysis on electrically heated residential buildings by smart sub-metering. ICIT (2018)
Luis Rueda, Alben Cardenas, Sousso Kelouwani, Kodjo Agbossou
Transient Event Classification Based on Wavelet Neuronal Network and Matched Filters. IECON (2018)
Shiladitya Chakrabarti, Roozbeh Razavi-Far, Mehrdad Saif, Luis Rueda
Multi-class heteroscedastic linear dimensionality reduction scheme for diagnosing process faults. CCECE (2017)
Yixun Li, Mina Maleki, Nicholas J. Carruthers, Luis Rueda, Paul M. Stemmer, Alioune Ngom
Prediction of Calmodulin-Binding Proteins Using Short-Linear Motifs. IWBBIO (2) (2017)
Pham Quang Huy, Luis Rueda, Alioune Ngom
Predicting Breast Cancer Outcome under Different Treatments by Feature Selection Approaches. BCB (2017)
Forough Firoozbakht, Iman Rezaeian, Michele D'agnillo, Lisa A. Porter, Luis Rueda, Alioune Ngom
An Integrative Approach for Identifying Network Biomarkers of Breast Cancer Subtypes Using Genomic, Interactomic, and Transcriptomic Data. J. Comput. Biol. 24 (8) (2017)
Abedalrhman Alkhateeb, Luis Rueda
Zseq: An Approach for Preprocessing Next-Generation Sequencing Data. J. Comput. Biol. 24 (8) (2017)
Naveen Mangalakumar, Abed Alkhateeb, Pham Quang Huy, Luis Rueda, Alioune Ngom
Outlier Genes as Biomarkers of Breast Cancer Survivability in Time-Series Data. BCB (2017)
Osama Hamzeh, Abedalrhman Alkhateeb, Iman Rezaeian, Aram Karkar, Luis Rueda
Finding Transcripts Associated with Prostate Cancer Gleason Stages Using Next Generation Sequencing and Machine Learning Techniques. IWBBIO (2) (2017)
Roozbeh Razavi-Far, Ehsan Hallaji, Mehrdad Saif, Luis Rueda
A Hybrid Scheme for Fault Diagnosis with Partially Labeled Sets of Observations. ICMLA (2017)
Ckristian Duran, D. Luis Rueda, Giovanny Castillo, Anderson Agudelo, Camilo Rojas, Luis Chaparro, Harry Hurtado, Juan Romero, Wilmer Ramirez, Héctor Gómez, Javier Ardila, Luis Rueda, Hugo Hernandez, Jose Amaya, Elkim Roa
A 32-bit RISC-V AXI4-lite bus-based microcontroller with 10-bit SAR ADC. LASCAS (2016)
Pham Quang Huy, Alioune Ngom, Luis Rueda
PAFS - An efficient method for classifier-specific feature selection. SSCI (2016)
Iman Rezaeian, Ahmad Tavakoli, Dora Cavallo-Medved, Lisa A. Porter, Luis Rueda
A novel model used to detect differential splice junctions as biomarkers in prostate cancer from RNA-Seq data. J. Biomed. Informatics 60 (2016)
Manal Alshehri, Iman Rezaeian, Abed Alkhateeb, Luis Rueda
A Machine Learning Model for Discovery of Protein Isoforms as Biomarkers. BCB (2016)
Maryam Farajzadeh-Zanjani, Roozbeh Razavi-Far, Mehrdad Saif, Luis Rueda
Efficient feature extraction of vibration signals for diagnosing bearing defects in induction motors. IJCNN (2016)
Pham Quang Huy, Alioune Ngom, Luis Rueda
A new feature selection approach for optimizing prediction models, applied to breast cancer subtype classification. BIBM (2016)
Roohollah Etemadi, Abedalrhman Alkhateeb, Iman Rezaeian, Luis Rueda
Identification of discriminative genes for predicting breast cancer subtypes. BIBM (2016)
Forough Firoozbakht, Iman Rezaeian, Alioune Ngom, Luis Rueda, Lisa A. Porter
A novel approach for finding informative genes in ten subtypes of breast cancer. CIBCB (2015)
Siva Singireddy, Abed Alkhateeb, Iman Rezaeian, Luis Rueda, Dora Cavallo-Medved, Lisa A. Porter
Identifying differentially expressed transcripts associated with prostate cancer progression using RNA-Seq and machine learning techniques. CIBCB (2015)
Forough Firoozbakht, Iman Rezaeian, Alioune Ngom, Luis Rueda
A new compact set of biomarkers for distinguishing among ten breast cancer subtypes. BIBM (2015)
Abed Alkhateeb, Iman Rezaeian, Siva Singireddy, Luis Rueda
Obtaining biomarkers in cancer progression from outliers of time-series clusters. BIBM (2015)
Yixun Li, Behzad Rezaei, Alioune Ngom, Luis Rueda
Prediction of high-throughput protein-protein interactions based on protein sequence information. CIBCB (2015)
Mina Maleki, Mohammad Haj Dezfulian, Luis Rueda
A Computational Domain-Based Feature Grouping Approach for Prediction of Stability of SCF Ligases. IWBBIO (1) (2015)
Yifeng Li, B. John Oommen, Alioune Ngom, Luis Rueda
Pattern classification using a new border identification paradigm: The nearest border technique. Neurocomputing 157 (2015)
Abed Alkhateeb, Iman Rezaeian, Luis Rueda
ZSeq 2.0: A fully automatic preprocessing method for next generation sequencing data. BIBM (2015)
Mina Maleki, Luis Rueda
Classification via correlation-based feature grouping. CIBCB (2015)
Mina Maleki, Luis Rueda, Mohammad Haj Dezfulian, William Crosby
Computational analysis of the stability of SCF ligases employing domain information. BCB (2014)
Luis Rueda, Manish Pandit
A model based on minimotifs for classification of stable protein-protein complexes. CIBCB (2014)
Forough Firoozbakht, Iman Rezaeian, Lisa A. Porter, Luis Rueda
Breast cancer subtype identification using machine learning techniques. ICCABS (2014)
Iman Rezaeian, Luis Rueda
A new multi-level thresholding algorithm for finding peaks in ChIP-Seq data. ICCABS (2014)
Mina Maleki, Michael Hall, Luis Rueda
Using desolvation energies of structural domains to predict stability of protein complexes. Netw. Model. Anal. Health Informatics Bioinform. 2 (4) (2013)
Manish Pandit, Luis Rueda, Alioune Ngom
Prediction of Biological Protein-protein Interaction Types Using Short-Linear Motifs. BCB (2013)
Iman Rezaeian, Yifeng Li, Martin Crozier, Eran Andrechek, Alioune Ngom, Luis Rueda, Lisa A. Porter
Identifying Informative Genes for Prediction of Breast Cancer Subtypes. PRIB (2013)
Yifeng Li, B. John Oommen, Alioune Ngom, Luis Rueda
A New Paradigm for Pattern Classification: Nearest Border Techniques. Australasian Conference on Artificial Intelligence (2013)
Iman Rezaeian, Luis Rueda
Finding genomic features from enriched regions in ChlP-Seq data. BIBM (2012)
Iman Rezaeian, Luis Rueda
A new algorithm for finding enriched regions in ChIP-Seq data. BCB (2012)
Sridip Banerjee, Luis Rueda, Mina Maleki
Prediction of crystal packing and biological protein-protein interactions. CIBCB (2012)
Mina Maleki, Michael Hall, Luis Rueda
Using structural domains to predict obligate and non-obligate protein-protein interactions. CIBCB (2012)
Gokul Vasudev, Luis Rueda
A model to predict and analyze protein-protein interaction types using electrostatic energies. BIBM (2012)
Yifeng Li, Alioune Ngom, Luis Rueda
A Framework of Gene Subset Selection Using Multiobjective Evolutionary Algorithm. PRIB (2012)
Michael Hall, Mina Maleki, Luis Rueda
Multi-level structural domain-domain interactions for prediction of obligate and non-obligate protein-protein interactions. BCB (2012)
Mina Maleki, Luis Rueda
Domain-domain interactions in obligate and non-obligate protein-protein interactions. BIBM Workshops (2011)
Luis Rueda, Iman Rezaeian
A Fully Automatic Gridding Method for cDNA Microarray Images. BMC Bioinform. 12 (2011)
Darío Rojas, Luis Rueda, Alioune Ngom, Homero Urrutia, Gerardo Carcamo
Image segmentation of biofilm structures using optimal multi-level thresholding. Int. J. Data Min. Bioinform. 5 (3) (2011)
Mina Maleki, Md. Mominul Aziz, Luis Rueda
Analysis of obligate and non-obligate complexes using desolvation energies in domain-domain interactions. BIOKDD (2011)
Mina Maleki, Md. Mominul Aziz, Luis Rueda
Analysis of relevant physicochemical properties in obligate and non-obligate protein-protein interactions. BIBM Workshops (2011)
Amirali Jafarian, Alioune Ngom, Luis Rueda
New Gene Subset Selection Approaches Based on Linear Separating Genes and Gene-Pairs. PRIB (2011)
Luis Rueda, Iman Rezaeian
Applications of Multilevel Thresholding Algorithms to Transcriptomics Data. CIARP (2011)
Iman Rezaeian, Luis Rueda
Biological assessment of grid and spot detection in cDNA microarray images. BCB (2011)
Amirali Jafarian, Alioune Ngom, Luis Rueda
A Novel Recursive Feature Subset Selection Algorithm. BIBE (2011)
Yifeng Li, Numanul Subhani, Alioune Ngom, Luis Rueda
Alignment-based versus variation-based transformation methods for clustering microarray time-series data. BCB (2010)
Iman Rezaeian, Luis Rueda
A parameterless automatic spot detection method for cDNA microarray images. BIBM (2010)
Alioune Ngom, Luis Rueda, Lili Wang, Robin Gras
Selection based heuristics for the non-unique oligonucleotide probe selection problem in microarray design. Pattern Recognit. Lett. 31 (14) (2010)
Luis Rueda, Sridip Banerjee, Md. Mominul Aziz, Mohammad Raza
Protein-protein interaction prediction using desolvation energies and interface properties. BIBM (2010)
Numanul Subhani, Luis Rueda, Alioune Ngom, Conrad J. Burden
New approaches to clustering microarray time-series data using multiple expression profile alignment. CIBCB (2010)
Yifeng Li, Alioune Ngom, Luis Rueda
Missing value imputation methods for gene-sample-time microarray data analysis. CIBCB (2010)
Luis Rueda, B. John Oommen, Claudio Henríquez
Multi-class pairwise linear dimensionality reduction using heteroscedastic schemes. Pattern Recognit. 43 (7) (2010)
Luis Rueda, Carolina Gárate, Sridip Banerjee, Md. Mominul Aziz
Biological Protein-Protein Interaction Prediction Using Binding Free Energies and Linear Dimensionality Reduction. PRIB (2010)
Iman Rezaeian, Luis Rueda
Sub-grid and Spot Detection in DNA Microarray Images Using Optimal Multi-level Thresholding. PRIB (2010)
Numanul Subhani, Yifeng Li, Alioune Ngom, Luis Rueda
Alignment versus variation methods for clustering microarray time-series data. IEEE Congress on Evolutionary Computation (2010)
Numanul Subhani, Luis Rueda, Alioune Ngom, Conrad J. Burden
Multiple gene expression profile alignment for microarray time-series data clustering. Bioinform. 26 (18) (2010)
M. Angélica Pinninghoff Junemann, A. Ricardo Contreras, Luis Rueda
An Evolutionary Approach for Correcting Random Amplified Polymorphism DNA Images. IWINAC (2) (2009)
Luis Rueda, Juan Carlos Rojas
A Pattern Classification Approach to DNA Microarray Image Segmentation. PRIB (2009)
Darío Rojas, Luis Rueda, Homero Urrutia, Alioune Ngom
Efficient Optimal Multi-level Thresholding for Biofilm Image Segmentation. PRIB (2009)
Darío Rojas, Luis Rueda, Alioune Ngom, Homero Urrutia, Gerardo Carcamo
Biofilm Image Segmentation Using Optimal Multi-level Thresholding. BIBM (2009)
Numanul Subhani, Alioune Ngom, Luis Rueda, Conrad J. Burden
Microarray Time-Series Data Clustering via Multiple Alignment of Gene Expression Profiles. PRIB (2009)
Luis Rueda
An Efficient Algorithm for Optimal Multilevel Thresholding of Irregularly Sampled Histograms. SSPR/SPR (2008)
Luis Rueda, Myriam Herrera
A theoretical comparison of two-class Fisher's and heteroscedastic linear dimensionality reduction schemes. Pattern Recognit. Lett. 29 (16) (2008)
Lili Wang, Alioune Ngom, Robin Gras, Luis Rueda
Evolution strategy with greedy probe selection heuristics for the non-unique oligonucleotide probe selection problem. CIBCB (2008)
Luis Rueda, Ataul Bari, Alioune Ngom
Clustering Time-Series Gene Expression Data with Unequal Time Intervals. Trans. Comp. Sys. Biology 10 (2008)
Luis Rueda, B. John Oommen
An efficient compression scheme for data communication which uses a new family of self-organizing binary search trees. Int. J. Commun. Syst. 21 (10) (2008)
Luis Rueda, Myriam Herrera
Linear dimensionality reduction by maximizing the Chernoff distance in the transformed space. Pattern Recognit. 41 (10) (2008)
Lili Wang, Alioune Ngom, Luis Rueda
Sequential Forward Selection Approach to the Non-unique Oligonucleotide Probe Selection Problem. PRIB (2008)
Luis Rueda, Claudio Henríquez, B. John Oommen
Chernoff-Based Multi-class Pairwise Linear Dimensionality Reduction. CIARP (2008)

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Publication Activity (10 Years)

Top Topics

Top Venues

Luis Rueda