Lisa N. Kinch

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 3

Top Topics

Linkage Disequilibrium

Classification Process

Functional Analysis

Top Venues

PLoS Comput. Biol.

Publications

R. Dustin Schaeffer, Jing Zhang, Kirill E. Medvedev, Lisa N. Kinch, Qian Cong, Nick V. Grishin
ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2. PLoS Comput. Biol. 20 (2) (2024)
Jimin Pei, Lisa N. Kinch, Zbyszek Otwinowski, Nick V. Grishin
Mutation severity spectrum of rare alleles in the human genome is predictive of disease type. PLoS Comput. Biol. 16 (5) (2020)
Kirill E. Medvedev, Lisa N. Kinch, R. Dustin Schaeffer, Nick V. Grishin
Functional analysis of Rossmann-like domains reveals convergent evolution of topology and reaction pathways. PLoS Comput. Biol. 15 (12) (2019)
Hua Cheng, R. Dustin Schaeffer, Yuxing Liao, Lisa N. Kinch, Jimin Pei, Shuoyong Shi, Bong-Hyun Kim, Nick V. Grishin
ECOD: An Evolutionary Classification of Protein Domains. PLoS Comput. Biol. 10 (12) (2014)
Wenlin Li, Lisa N. Kinch, Nick V. Grishin
Pclust: protein network visualization highlighting experimental data. Bioinform. 29 (20) (2013)
Wenlin Li, Qian Cong, Lisa N. Kinch, Nick V. Grishin
Seq2Ref: a web server to facilitate functional interpretation. BMC Bioinform. 14 (2013)
Qian Cong, Lisa N. Kinch, Jimin Pei, Shuoyong Shi, Vyacheslav N. Grishin, Wenlin Li, Nick V. Grishin
An automatic method for CASP9 free modeling structure prediction assessment. Bioinform. 27 (24) (2011)
Qian Cong, Bong-Hyun Kim, Lisa N. Kinch, Nick V. Grishin
Structural Differences between Proteins with Similar Sequences. BIBE (2010)
Shuoyong Shi, Jimin Pei, Ruslan Sadreyev, Lisa N. Kinch, Indraneel Majumdar, Jing Tong, Hua Cheng, Bong-Hyun Kim, Nick V. Grishin
Analysis of CASP8 targets, predictions and assessment methods. Database J. Biol. Databases Curation 2009 (2009)
Jimin Pei, Wei Cai, Lisa N. Kinch, Nick V. Grishin
Prediction of functional specificity determinants from protein sequences using log-likelihood ratios. Bioinform. 22 (2) (2006)
Sara Cheek, Yuan Qi, S. Sri Krishna, Lisa N. Kinch, Nick V. Grishin
SCOPmap: Automated assignment of protein structures to evolutionary superfamilies. BMC Bioinform. 5 (2004)