R. Dustin Schaeffer

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 4

Top Topics

Chemical Reaction

Support Vector Machine

Protein Classification

Top Venues

PLoS Comput. Biol.

Nucleic Acids Res.

Publications

R. Dustin Schaeffer, Jing Zhang, Kirill E. Medvedev, Lisa N. Kinch, Qian Cong, Nick V. Grishin
ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2. PLoS Comput. Biol. 20 (2) (2024)
Kirill E. Medvedev, Lisa N. Kinch, R. Dustin Schaeffer, Nick V. Grishin
Functional analysis of Rossmann-like domains reveals convergent evolution of topology and reaction pathways. PLoS Comput. Biol. 15 (12) (2019)
Yuxing Liao, R. Dustin Schaeffer, Jimin Pei, Nick V. Grishin
A sequence family database built on ECOD structural domains. Bioinform. 34 (17) (2018)
R. Dustin Schaeffer, Yuxing Liao, Hua Cheng, Nick V. Grishin
ECOD: new developments in the evolutionary classification of domains. Nucleic Acids Res. 45 (Database-Issue) (2017)
Hua Cheng, R. Dustin Schaeffer, Yuxing Liao, Lisa N. Kinch, Jimin Pei, Shuoyong Shi, Bong-Hyun Kim, Nick V. Grishin
ECOD: An Evolutionary Classification of Protein Domains. PLoS Comput. Biol. 10 (12) (2014)
R. Dustin Schaeffer, Amanda L. Jonsson, Andrew M. Simms, Valerie Daggett
Generation of a consensus protein domain dictionary. Bioinform. 27 (1) (2011)