Lin Ning

Publication Activity (10 Years)

Years Active: 2006-2024
Publications (10 Years): 19

Top Topics

Attention Mechanism

Questionnaire Survey

Protein Sequences

Top Venues

Nucleic Acids Res.

Comput. Biol. Medicine

Publications

Bakanina Kissanga Grace-Mercure, Hasan Zulfiqar, Shenghan Gao, Sophyani Banaamwini Yussif, Biffon Manyura Momanyi, Lin Ning, Hao Lin, Cheng-Bing Huang
E-MuLA: An Ensemble Multi-Localized Attention Feature Extraction Network for Viral Protein Subcellular Localization. Inf. 15 (3) (2024)
Baocai Zhong, Yongfang Dai, Li Chen, Xinying Xu, Yuxi Lan, Leyao Deng, Liping Ren, Nanchao Luo, Lin Ning
ncRS: A resource of non-coding RNAs in sepsis. Comput. Biol. Medicine 172 (2024)
Lin Ning, Luyang Liu, Jiaxing Wu, Neo Wu, Devora Berlowitz, Sushant Prakash, Bradley Green, Shawn O'Banion, Jun Xie
User-LLM: Efficient LLM Contextualization with User Embeddings. CoRR (2024)
Liping Ren, Lin Ning, Yu Yang, Ting Yang, Xinyu Li, Shanshan Tan, Peixin Ge, Shun Li, Nanchao Luo, Pei Tao, Yang Zhang
MetaboliteCOVID: A manually curated database of metabolite markers for COVID-19. Comput. Biol. Medicine 167 (2023)
Honglin Yuan, Warren Richard Morningstar, Lin Ning, Karan Singhal
What Do We Mean by Generalization in Federated Learning? ICLR (2022)
Zhao-Yue Zhang, Lin Ning, Xiucai Ye, Yu-He Yang, Yasunori Futamura, Tetsuya Sakurai, Hao Lin
iLoc-miRNA: extracellular/intracellular miRNA prediction using deep BiLSTM with attention mechanism. Briefings Bioinform. 23 (5) (2022)
Lin Ning, Steve Chien, Shuang Song, Mei Chen, Yunqi Xue, Devora Berlowitz
EANA: Reducing Privacy Risk on Large-scale Recommendation Models. RecSys (2022)
Haibo Zhu, Hao Fu, Tianyu Cui, Lin Ning, Huaguo Shao, Yehan Guo, Yanting Ke, Jiayi Zheng, Hongyan Lin, Xin Wu, Guanghao Liu, Jun He, Xin Han, Wenlin Li, Xiaoyang Zhao, Huasong Lu, Dong Wang, Kongfa Hu, Xiaopei Shen
RNAPhaSep: a resource of RNAs undergoing phase separation. Nucleic Acids Res. 50 (D1) (2022)
Bowen Li, Shanshan Yang, Jinjin Long, Xue Chen, Qianyue Zhang, Lin Ning, Bifang He, Heng Chen, Jian Huang
AGODB: a comprehensive domain annotation database of argonaute proteins. Database J. Biol. Databases Curation 2022 (2022) (2022)
Jun Cheng, Yunqing Lin, Linfu Xu, Kechen Chen, Qi Li, Kaixin Xu, Lin Ning, Juanjuan Kang, Tianyu Cui, Yan Huang, Xiaoyang Zhao, Dong Wang, Yanhui Li, Xi Su, Bin Yang
ViRBase v3.0: a virus and host ncRNA-associated interaction repository with increased coverage and annotation. Nucleic Acids Res. 50 (D1) (2022)
Sean Augenstein, Andrew Hard, Lin Ning, Karan Singhal, Satyen Kale, Kurt Partridge, Rajiv Mathews
Mixed Federated Learning: Joint Decentralized and Centralized Learning. CoRR (2022)
Zijie Sun, Qinlai Huang, Yuhe Yang, Shihao Li, Hao Lv, Yang Zhang, Hao Lin, Lin Ning
PSnoD: identifying potential snoRNA-disease associations based on bounded nuclear norm regularization. Briefings Bioinform. 23 (4) (2022)
Jianqiang Xiao, Mujiexin Liu, Qinlai Huang, Zijie Sun, Lin Ning, Junguo Duan, Siquan Zhu, Jian Huang, Hao Lin, Hui Yang
Analysis and modeling of myopia-related factors based on questionnaire survey. Comput. Biol. Medicine 150 (2022)
Lin Ning, Karan Singhal, Ellie X. Zhou, Sushant Prakash
Learning Federated Representations and Recommendations with Limited Negatives. CoRR (2021)
Lin Ning, Tianyu Cui, Boyang Zheng, Nuo Wang, Jiaxin Luo, Beilei Yang, Mengze Du, Jun Cheng, Yiying Dou, Dong Wang
MNDR v3.0: mammal ncRNA-disease repository with increased coverage and annotation. Nucleic Acids Res. 49 (Database-Issue) (2021)
Yang Zhang, Tianyuan Liu, Jing Wang, Bohao Zou, Le Li, Linhui Yao, Kechen Chen, Lin Ning, Bingyi Wu, Xiaoyang Zhao, Dong Wang
Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis. Bioinform. 37 (14) (2021)
Honglin Yuan, Warren R. Morningstar, Lin Ning, Karan Singhal
What Do We Mean by Generalization in Federated Learning? CoRR (2021)
Yan Huang, Jing Wang, Yue Zhao, Huafeng Wang, Tianyuan Liu, Yuhe Li, Tianyu Cui, Weiyi Li, Yige Feng, Jiaxin Luo, Jiaqi Gong, Lin Ning, Yong Zhang, Dong Wang, Yang Zhang
cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function. Nucleic Acids Res. 49 (Database-Issue) (2021)
Yang Zhang, Tianyuan Liu, Liqun Chen, Jinxurong Yang, Jiayi Yin, Yuncong Zhang, Zhixi Yun, Hao Xu, Lin Ning, Feng-Biao Guo, Yongshuai Jiang, Hao Lin, Dong Wang, Yan Huang, Jian Huang
RIscoper: a tool for RNA-RNA interaction extraction from the literature. Bioinform. 35 (17) (2019)
Junda Liu, Lin Ning, Yibo Xue, Dongsheng Wang
PIFF: An Intelligent File Filtering Mechanism for Peer-to-Peer Network. DASC (2006)